Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:57013362-57063700

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17949 17 57012601 to 57019601 7000 + pseudogene predicted gene, 17949
Khsrp 17 57021049 to 57031507 10458 - protein coding gene KH-type splicing regulatory protein
Tssr148859 17 57021309 to 57021327 18 - TSS region transcription start site region 148859
Tssr148860 17 57021450 to 57021475 25 - TSS region transcription start site region 148860
Tssr148861 17 57021687 to 57021700 13 - TSS region transcription start site region 148861
Tssr148862 17 57022024 to 57022049 25 - TSS region transcription start site region 148862
Tssr148863 17 57022088 to 57022150 62 - TSS region transcription start site region 148863
Tssr148864 17 57022421 to 57022436 15 - TSS region transcription start site region 148864
Tssr148865 17 57022461 to 57022509 48 - TSS region transcription start site region 148865
Cpgi9387 17 57022618 to 57022788 170 CpG island CpG island 9387
Tssr148866 17 57023545 to 57023555 10 - TSS region transcription start site region 148866
Tssr148867 17 57024272 to 57024300 28 - TSS region transcription start site region 148867
Tssr5179 17 57024820 to 57024831 11 + TSS region transcription start site region 5179
Cpgi9388 17 57030680 to 57032283 1603 CpG island CpG island 9388
Tssr5180 17 57031438 to 57031443 5 - TSS region transcription start site region 5180
Tssr148868 17 57031468 to 57031538 70 - TSS region transcription start site region 148868
Tssr148869 17 57031540 to 57031551 11 - TSS region transcription start site region 148869
Tssr145364 17 57032213 to 57032235 22 + TSS region transcription start site region 145364
Slc25a41 17 57032773 to 57041654 8881 - protein coding gene solute carrier family 25, member 41
Cpgi9389 17 57038362 to 57038700 338 CpG island CpG island 9389
Tssr148870 17 57041659 to 57041662 3 - TSS region transcription start site region 148870
Gm17168 17 57041775 to 57047143 5368 + antisense lncRNA gene predicted gene 17168
Slc25a23 17 57043711 to 57059863 16152 - protein coding gene solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
Tssr148871 17 57044090 to 57044110 20 - TSS region transcription start site region 148871
Tssr148872 17 57044501 to 57044521 20 - TSS region transcription start site region 148872
Tssr148873 17 57044536 to 57044551 15 - TSS region transcription start site region 148873
Tssr148874 17 57045319 to 57045361 42 - TSS region transcription start site region 148874
Tssr5181 17 57045569 to 57045602 33 - TSS region transcription start site region 5181
Cpgi9390 17 57059174 to 57059958 784 CpG island CpG island 9390
Tssr148875 17 57059795 to 57059857 62 - TSS region transcription start site region 148875
Cpgi9391 17 57060208 to 57060823 615 CpG island CpG island 9391
Tssr145365 17 57060735 to 57060757 22 + TSS region transcription start site region 145365
Crb3 17 57061627 to 57068117 6490 + protein coding gene crumbs family member 3
Cpgi9392 17 57061964 to 57062893 929 CpG island CpG island 9392
Tssr148876 17 57061989 to 57061995 6 - TSS region transcription start site region 148876
Tssr145366 17 57062260 to 57062315 55 + TSS region transcription start site region 145366
Tssr145367 17 57062317 to 57062337 20 + TSS region transcription start site region 145367
Tssr145368 17 57062353 to 57062360 7 + TSS region transcription start site region 145368
Tssr145369 17 57062486 to 57062523 37 + TSS region transcription start site region 145369
Tssr145370 17 57062525 to 57062542 17 + TSS region transcription start site region 145370