Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56984418-57024433

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33509 17 56988162 to 56990107 1945 - lncRNA gene predicted gene, 33509
Cpgi9384 17 56989763 to 56990819 1056 CpG island CpG island 9384
Tssr145357 17 56990260 to 56990267 7 + TSS region transcription start site region 145357
Tssr145358 17 56990284 to 56990330 46 + TSS region transcription start site region 145358
Clpp 17 56990305 to 56996188 5883 + protein coding gene caseinolytic mitochondrial matrix peptidase proteolytic subunit
Tssr145359 17 56990331 to 56990350 19 + TSS region transcription start site region 145359
Tssr145360 17 56990398 to 56990410 12 + TSS region transcription start site region 145360
Cpgi9385 17 56997122 to 56997916 794 CpG island CpG island 9385
Tssr145361 17 56997332 to 56997365 33 + TSS region transcription start site region 145361
Alkbh7 17 56997339 to 56999322 1983 + protein coding gene alkB homolog 7
Pspn 17 56999457 to 57000018 561 - protein coding gene persephin
Gtf2f1 17 57003405 to 57011288 7883 - protein coding gene general transcription factor IIF, polypeptide 1
Tssr148848 17 57004418 to 57004433 15 - TSS region transcription start site region 148848
Tssr148849 17 57004690 to 57004713 23 - TSS region transcription start site region 148849
Tssr148850 17 57004810 to 57004828 18 - TSS region transcription start site region 148850
Tssr148851 17 57004864 to 57004892 28 - TSS region transcription start site region 148851
Tssr148852 17 57005449 to 57005469 20 - TSS region transcription start site region 148852
Tssr148853 17 57007063 to 57007090 27 - TSS region transcription start site region 148853
Cpgi9386 17 57010841 to 57011967 1126 CpG island CpG island 9386
Tssr148854 17 57011221 to 57011232 11 - TSS region transcription start site region 148854
Tssr148855 17 57011247 to 57011259 12 - TSS region transcription start site region 148855
Tssr148856 17 57011271 to 57011326 55 - TSS region transcription start site region 148856
Tssr148857 17 57011390 to 57011405 15 - TSS region transcription start site region 148857
Tssr145362 17 57011580 to 57011596 16 + TSS region transcription start site region 145362
Tssr148858 17 57011645 to 57011649 4 - TSS region transcription start site region 148858
Tssr145363 17 57011759 to 57011794 35 + TSS region transcription start site region 145363
Gm17949 17 57012601 to 57019601 7000 + pseudogene predicted gene, 17949
Khsrp 17 57021049 to 57031507 10458 - protein coding gene KH-type splicing regulatory protein
Tssr148859 17 57021309 to 57021327 18 - TSS region transcription start site region 148859
Tssr148860 17 57021450 to 57021475 25 - TSS region transcription start site region 148860
Tssr148861 17 57021687 to 57021700 13 - TSS region transcription start site region 148861
Tssr148862 17 57022024 to 57022049 25 - TSS region transcription start site region 148862
Tssr148863 17 57022088 to 57022150 62 - TSS region transcription start site region 148863
Tssr148864 17 57022421 to 57022436 15 - TSS region transcription start site region 148864
Tssr148865 17 57022461 to 57022509 48 - TSS region transcription start site region 148865
Cpgi9387 17 57022618 to 57022788 170 CpG island CpG island 9387
Tssr148866 17 57023545 to 57023555 10 - TSS region transcription start site region 148866
Tssr148867 17 57024272 to 57024300 28 - TSS region transcription start site region 148867