Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46232991-46333026

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xpo5 17 46202855 to 46242299 39444 + protein coding gene exportin 5
Polr1c 17 46243920 to 46248045 4125 - protein coding gene polymerase (RNA) I polypeptide C
Cpgi9219 17 46247517 to 46248932 1415 CpG island CpG island 9219
Tssr148308 17 46247969 to 46248000 31 - TSS region transcription start site region 148308
Tssr144838 17 46248069 to 46248139 70 + TSS region transcription start site region 144838
Yipf3 17 46248080 to 46252537 4457 + protein coding gene Yip1 domain family, member 3
Tssr144839 17 46248173 to 46248176 3 + TSS region transcription start site region 144839
Tssr144840 17 46248192 to 46248201 9 + TSS region transcription start site region 144840
Cpgi9220 17 46253457 to 46254940 1483 CpG island CpG island 9220
Tssr144841 17 46253917 to 46253978 61 + TSS region transcription start site region 144841
Tssr144842 17 46253981 to 46253986 5 + TSS region transcription start site region 144842
Tssr144843 17 46254017 to 46254022 5 + TSS region transcription start site region 144843
Lrrc73 17 46254165 to 46257316 3151 + protein coding gene leucine rich repeat containing 73
Tjap1 17 46257851 to 46283026 25175 - protein coding gene tight junction associated protein 1
Tssr148309 17 46264595 to 46264596 1 - TSS region transcription start site region 148309
Tssr148310 17 46264933 to 46264953 20 - TSS region transcription start site region 148310
Tssr148311 17 46270788 to 46270809 21 - TSS region transcription start site region 148311
Tssr148312 17 46270813 to 46270824 11 - TSS region transcription start site region 148312
Tssr148313 17 46270851 to 46270864 13 - TSS region transcription start site region 148313
Gm26785 17 46273479 to 46280060 6581 + lincRNA gene predicted gene, 26785
Tssr148314 17 46282482 to 46282493 11 - TSS region transcription start site region 148314
Tssr148315 17 46282648 to 46282676 28 - TSS region transcription start site region 148315
Tssr148316 17 46282991 to 46283026 35 - TSS region transcription start site region 148316
D17Mit235 17 46284264 to 46284354 90 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 235
Cpgi9221 17 46297269 to 46299104 1835 CpG island CpG island 9221
Tssr144844 17 46297406 to 46297447 41 + TSS region transcription start site region 144844
Dlk2 17 46297421 to 46303271 5850 + protein coding gene delta like non-canonical Notch ligand 2
Tssr144845 17 46297852 to 46297863 11 + TSS region transcription start site region 144845
Tssr144846 17 46297917 to 46297938 21 + TSS region transcription start site region 144846
Gm41588 17 46299018 to 46300090 1072 + lncRNA gene predicted gene, 41588
Abcc10 17 46303230 to 46328032 24802 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 10
Cpgi9222 17 46327570 to 46328600 1030 CpG island CpG island 9222
Tssr148317 17 46327949 to 46327987 38 - TSS region transcription start site region 148317
Tssr148318 17 46327990 to 46328001 11 - TSS region transcription start site region 148318
Tssr144847 17 46328083 to 46328136 53 + TSS region transcription start site region 144847