Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46152487-46252515

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mad2l1bp 17 46147385 to 46153551 6166 - protein coding gene MAD2L1 binding protein
Cpgi9216 17 46153300 to 46153682 382 CpG island CpG island 9216
Tssr148302 17 46153497 to 46153511 14 - TSS region transcription start site region 148302
Tssr148303 17 46153517 to 46153543 26 - TSS region transcription start site region 148303
D17Mit138 17 46158635 to 46158776 141 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 138
Alan1 17 46158776 to 4804477 -41354299 QTL alloantigen response 1
Tssr144818 17 46159212 to 46159223 11 + TSS region transcription start site region 144818
Tssr144819 17 46159268 to 46159277 9 + TSS region transcription start site region 144819
Tssr144820 17 46159565 to 46159611 46 + TSS region transcription start site region 144820
Tssr148304 17 46160410 to 46160417 7 - TSS region transcription start site region 148304
Tssr144821 17 46160561 to 46160577 16 + TSS region transcription start site region 144821
Cpgi9217 17 46160723 to 46161349 626 CpG island CpG island 9217
Tssr144822 17 46161021 to 46161072 51 + TSS region transcription start site region 144822
Gtpbp2 17 46161032 to 46169370 8338 + protein coding gene GTP binding protein 2
Tssr144823 17 46161074 to 46161085 11 + TSS region transcription start site region 144823
Tssr144824 17 46161126 to 46161148 22 + TSS region transcription start site region 144824
Tssr144825 17 46161149 to 46161168 19 + TSS region transcription start site region 144825
Tssr144826 17 46163075 to 46163121 46 + TSS region transcription start site region 144826
Tssr144827 17 46163153 to 46163183 30 + TSS region transcription start site region 144827
Tssr144828 17 46163202 to 46163225 23 + TSS region transcription start site region 144828
Tssr144829 17 46163232 to 46163252 20 + TSS region transcription start site region 144829
Tssr144830 17 46163456 to 46163486 30 + TSS region transcription start site region 144830
Polh 17 46171355 to 46202645 31290 - protein coding gene polymerase (DNA directed), eta (RAD 30 related)
Cpgi9218 17 46202031 to 46203608 1577 CpG island CpG island 9218
Tssr148305 17 46202450 to 46202473 23 - TSS region transcription start site region 148305
Tssr148306 17 46202487 to 46202515 28 - TSS region transcription start site region 148306
Tssr148307 17 46202576 to 46202673 97 - TSS region transcription start site region 148307
Tssr144831 17 46202740 to 46202854 114 + TSS region transcription start site region 144831
Xpo5 17 46202855 to 46242299 39444 + protein coding gene exportin 5
Tssr144832 17 46202861 to 46202878 17 + TSS region transcription start site region 144832
Tssr144833 17 46227770 to 46227780 10 + TSS region transcription start site region 144833
Tssr144834 17 46227788 to 46227799 11 + TSS region transcription start site region 144834
Tssr144835 17 46227803 to 46227808 5 + TSS region transcription start site region 144835
Tssr144836 17 46227827 to 46227830 3 + TSS region transcription start site region 144836
Tssr144837 17 46227869 to 46227870 1 + TSS region transcription start site region 144837
Mir693 17 46231531 to 46231619 88 + miRNA gene microRNA 693
Gm22474 17 46232725 to 46232831 106 - snRNA gene predicted gene, 22474
Polr1c 17 46243920 to 46248045 4125 - protein coding gene polymerase (RNA) I polypeptide C
Cpgi9219 17 46247517 to 46248932 1415 CpG island CpG island 9219
Tssr148308 17 46247969 to 46248000 31 - TSS region transcription start site region 148308
Tssr144838 17 46248069 to 46248139 70 + TSS region transcription start site region 144838
Yipf3 17 46248080 to 46252537 4457 + protein coding gene Yip1 domain family, member 3
Tssr144839 17 46248173 to 46248176 3 + TSS region transcription start site region 144839
Tssr144840 17 46248192 to 46248201 9 + TSS region transcription start site region 144840