Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:45473416-45573451

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spats1 17 45445877 to 45475194 29317 - protein coding gene spermatogenesis associated, serine-rich 1
Cpgi9184 17 45474651 to 45475144 493 CpG island CpG island 9184
Tssr148201 17 45474839 to 45474885 46 - TSS region transcription start site region 148201
Tssr144777 17 45487387 to 45487398 11 + TSS region transcription start site region 144777
Tssr5127 17 45487400 to 45487405 5 + TSS region transcription start site region 5127
Tssr144778 17 45487407 to 45487422 15 + TSS region transcription start site region 144778
Tssr144779 17 45487435 to 45487446 11 + TSS region transcription start site region 144779
Tssr144780 17 45487452 to 45487463 11 + TSS region transcription start site region 144780
Tssr148202 17 45488375 to 45488391 16 - TSS region transcription start site region 148202
Tssr148203 17 45488583 to 45488588 5 - TSS region transcription start site region 148203
Tssr148204 17 45488664 to 45488702 38 - TSS region transcription start site region 148204
Tssr144781 17 45495737 to 45495759 22 + TSS region transcription start site region 144781
Cpgi9185 17 45506757 to 45507203 446 CpG island CpG island 9185
Tssr144782 17 45506825 to 45506857 32 + TSS region transcription start site region 144782
Aars2 17 45506841 to 45520843 14002 + protein coding gene alanyl-tRNA synthetase 2, mitochondrial
Tssr144783 17 45519372 to 45519397 25 + TSS region transcription start site region 144783
Cpgi9186 17 45523322 to 45523632 310 CpG island CpG island 9186
Tssr144784 17 45523416 to 45523451 35 + TSS region transcription start site region 144784
Tcte1 17 45523434 to 45542679 19245 + protein coding gene t-complex-associated testis expressed 1
Tssr144785 17 45523499 to 45523532 33 + TSS region transcription start site region 144785
Cpgi9187 17 45530499 to 45530666 167 CpG island CpG island 9187
Cpgi9188 17 45534710 to 45535152 442 CpG island CpG island 9188
Cpgi9189 17 45539627 to 45540062 435 CpG island CpG island 9189
Tssr144786 17 45539652 to 45539653 1 + TSS region transcription start site region 144786
Tmem151b 17 45541952 to 45549677 7725 - protein coding gene transmembrane protein 151B
D17Mit35 17 45542443 to 45542672 229 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 35
Tssr148205 17 45544377 to 45544381 4 - TSS region transcription start site region 148205
Cpgi9190 17 45544649 to 45546181 1532 CpG island CpG island 9190
Tssr5128 17 45545753 to 45545759 6 + TSS region transcription start site region 5128
Cpgi9191 17 45546804 to 45547106 302 CpG island CpG island 9191
Cpgi9192 17 45548555 to 45549985 1430 CpG island CpG island 9192
Tssr148206 17 45549546 to 45549583 37 - TSS region transcription start site region 148206
Tssr148207 17 45549655 to 45549668 13 - TSS region transcription start site region 148207
Tssr148208 17 45549687 to 45549719 32 - TSS region transcription start site region 148208
Cpgi9193 17 45555575 to 45556316 741 CpG island CpG island 9193
Tssr144787 17 45555636 to 45555673 37 + TSS region transcription start site region 144787
Tssr144788 17 45555693 to 45555714 21 + TSS region transcription start site region 144788
Nfkbie 17 45555703 to 45563169 7466 + protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon
Tssr144789 17 45555727 to 45555746 19 + TSS region transcription start site region 144789
Tssr144790 17 45555794 to 45555799 5 + TSS region transcription start site region 144790
Tssr144791 17 45555805 to 45555817 12 + TSS region transcription start site region 144791
Tssr144792 17 45555878 to 45555900 22 + TSS region transcription start site region 144792
Tssr144793 17 45556259 to 45556270 11 + TSS region transcription start site region 144793
Cpgi9194 17 45560322 to 45560532 210 CpG island CpG island 9194
Tssr144794 17 45561004 to 45561008 4 + TSS region transcription start site region 144794
Cpgi9195 17 45563710 to 45564696 986 CpG island CpG island 9195
Slc35b2 17 45563879 to 45567671 3792 + protein coding gene solute carrier family 35, member B2
Tssr144795 17 45563928 to 45563973 45 + TSS region transcription start site region 144795
Tssr144796 17 45563978 to 45563987 9 + TSS region transcription start site region 144796
Hsp90ab1 17 45567778 to 45573261 5483 - protein coding gene heat shock protein 90 alpha (cytosolic), class B member 1
Tssr148209 17 45567985 to 45568009 24 - TSS region transcription start site region 148209
Tssr148210 17 45568011 to 45568030 19 - TSS region transcription start site region 148210
Tssr148211 17 45568061 to 45568082 21 - TSS region transcription start site region 148211
Tssr148212 17 45568272 to 45568282 10 - TSS region transcription start site region 148212
Tssr144797 17 45568356 to 45568382 26 + TSS region transcription start site region 144797
Tssr148213 17 45568381 to 45568415 34 - TSS region transcription start site region 148213
Tssr148214 17 45568535 to 45568549 14 - TSS region transcription start site region 148214
Tssr144798 17 45568909 to 45568953 44 + TSS region transcription start site region 144798
Tssr148215 17 45568962 to 45568976 14 - TSS region transcription start site region 148215
Tssr148216 17 45568993 to 45569013 20 - TSS region transcription start site region 148216
Tssr148217 17 45569033 to 45569072 39 - TSS region transcription start site region 148217
Tssr148218 17 45569098 to 45569109 11 - TSS region transcription start site region 148218
Tssr5129 17 45569282 to 45569294 12 - TSS region transcription start site region 5129
Tssr148219 17 45569297 to 45569318 21 - TSS region transcription start site region 148219
Tssr148220 17 45569346 to 45569381 35 - TSS region transcription start site region 148220
Tssr148221 17 45569560 to 45569582 22 - TSS region transcription start site region 148221
Tssr148222 17 45569590 to 45569612 22 - TSS region transcription start site region 148222
Tssr148223 17 45569619 to 45569647 28 - TSS region transcription start site region 148223
Tssr148224 17 45569763 to 45569798 35 - TSS region transcription start site region 148224
Tssr144799 17 45570295 to 45570317 22 + TSS region transcription start site region 144799
Tssr148225 17 45570325 to 45570382 57 - TSS region transcription start site region 148225
Tssr144800 17 45570335 to 45570348 13 + TSS region transcription start site region 144800
Tssr144801 17 45570364 to 45570388 24 + TSS region transcription start site region 144801
Tssr144802 17 45570401 to 45570461 60 + TSS region transcription start site region 144802
Tssr148226 17 45570436 to 45570504 68 - TSS region transcription start site region 148226
Tssr144803 17 45570464 to 45570469 5 + TSS region transcription start site region 144803
Tssr144804 17 45570508 to 45570536 28 + TSS region transcription start site region 144804
Tssr148227 17 45570581 to 45570611 30 - TSS region transcription start site region 148227
Tssr148228 17 45570699 to 45570714 15 - TSS region transcription start site region 148228
Tssr144805 17 45570722 to 45570729 7 + TSS region transcription start site region 144805
Tssr148229 17 45570786 to 45570805 19 - TSS region transcription start site region 148229
Tssr148230 17 45571037 to 45571064 27 - TSS region transcription start site region 148230
Tssr148231 17 45571068 to 45571073 5 - TSS region transcription start site region 148231
Tssr148232 17 45571126 to 45571158 32 - TSS region transcription start site region 148232
Tssr5130 17 45571462 to 45571484 22 - TSS region transcription start site region 5130
Tssr148233 17 45571503 to 45571559 56 - TSS region transcription start site region 148233
Cpgi9196 17 45572356 to 45574471 2115 CpG island CpG island 9196
Tssr148234 17 45572441 to 45572477 36 - TSS region transcription start site region 148234
Tssr148235 17 45572495 to 45572506 11 - TSS region transcription start site region 148235
Tssr148236 17 45572877 to 45572898 21 - TSS region transcription start site region 148236
Tssr148237 17 45573262 to 45573272 10 - TSS region transcription start site region 148237
Gm35399 17 45573315 to 45574790 1475 + lncRNA gene predicted gene, 35399