Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:71681571-72521673

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfnq3 15 40313626 to 72500731 32187105 QTL lung function QTL 3
Fam135b 15 71438951 to 71728434 289483 - protein coding gene family with sequence similarity 135, member B
Cpgi7149 15 71727669 to 71728476 807 CpG island CpG island 7149
Tssr134640 15 71727733 to 71727744 11 - TSS region transcription start site region 134640
Tssr134641 15 71727815 to 71727848 33 - TSS region transcription start site region 134641
Tssr134642 15 71727885 to 71727909 24 - TSS region transcription start site region 134642
Tssr134643 15 71728224 to 71728244 20 - TSS region transcription start site region 134643
Tssr134644 15 71728282 to 71728293 11 - TSS region transcription start site region 134644
Gm47309 15 71794186 to 71794290 104 + miRNA gene predicted gene, 47309
Gm22519 15 71794188 to 71794365 177 + snoRNA gene predicted gene, 22519
Gm2999 15 71794570 to 71795107 537 + pseudogene predicted gene 2999
Col22a1 15 71795795 to 72034227 238432 - protein coding gene collagen, type XXII, alpha 1
Hwtf1 15 71800000 to 73000000 1200000 QTL heart weight by femur 1
Gm16308 15 71810108 to 71813780 3672 + antisense lncRNA gene predicted gene 16308
Cath5 15 71917280 to 71917280 0 QTL carotid atherosclerosis 5
Tssr134645 15 71954352 to 71954364 12 - TSS region transcription start site region 134645
Tssr134646 15 71954368 to 71954381 13 - TSS region transcription start site region 134646
Tssr134647 15 71954386 to 71954393 7 - TSS region transcription start site region 134647
Tssr134648 15 71954395 to 71954424 29 - TSS region transcription start site region 134648
Cpgi7150 15 72006738 to 72007054 316 CpG island CpG island 7150
Tssr134649 15 72034202 to 72034224 22 - TSS region transcription start site region 134649
D15Mit157 15 72101571 to 72101673 102 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 157
Gm49457 15 72161346 to 72287314 125968 + lincRNA gene predicted gene, 49457
Milac6 15 72211957 to 72211957 0 QTL methamphetamine induced locomotor activation 6
Gm23217 15 72255350 to 72255456 106 - snRNA gene predicted gene, 23217
Gm24390 15 72490958 to 72491019 61 - snRNA gene predicted gene, 24390
Emo2 15 72500610 to 76910293 4409683 QTL emotionality 2
D15Mit105 15 72500610 to 72500731 121 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 105
Cocia2 15 72500610 to 80014977 7514367 QTL cocaine induced activation 2
Kcnk9 15 72501089 to 72546340 45251 - protein coding gene potassium channel, subfamily K, member 9
A930009L07Rik 15 72506988 to 72509257 2269 unclassified non-coding RNA gene RIKEN cDNA A930009L07 gene
Cpgi7151 15 72512126 to 72512586 460 CpG island CpG island 7151