Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:63142829-64882836

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116 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30159 15 63110465 to 63145446 34981 - lincRNA gene predicted gene, 30159
Gm49013 15 63146233 to 63146716 483 + pseudogene predicted gene, 49013
Gm49014 15 63255904 to 63278780 22876 + lincRNA gene predicted gene, 49014
Tssr131448 15 63255938 to 63255953 15 + TSS region transcription start site region 131448
Tssr134492 15 63270456 to 63270461 5 - TSS region transcription start site region 134492
Gm41335 15 63353241 to 63357026 3785 - lincRNA gene predicted gene, 41335
Gm20740 15 63414397 to 63479608 65211 - lncRNA gene predicted gene, 20740
Tssr134493 15 63470893 to 63470897 4 - TSS region transcription start site region 134493
Tssr131449 15 63476200 to 63476204 4 + TSS region transcription start site region 131449
Tssr134494 15 63479543 to 63479554 11 - TSS region transcription start site region 134494
Tssr134495 15 63479622 to 63479646 24 - TSS region transcription start site region 134495
Tssr134496 15 63479661 to 63479670 9 - TSS region transcription start site region 134496
Gm25702 15 63481214 to 63481276 62 - snRNA gene predicted gene, 25702
Gm4942 15 63490962 to 63492293 1331 - pseudogene predicted gene 4942
Msq1 15 63517797 to 81202235 17684438 QTL MAV-1 susceptibility QTL 1
Alaa4 15 63517797 to 63517996 199 QTL alopecia areata 4
Amzn3 15 63517797 to 63517996 199 QTL anatomical modifier of Zfp423 3
D15Mit270 15 63517797 to 63517996 199 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 270
Tssr4608 15 63530300 to 63530302 2 + TSS region transcription start site region 4608
Cpgi7134 15 63572957 to 63573277 320 CpG island CpG island 7134
Tssr134497 15 63611212 to 63611224 12 - TSS region transcription start site region 134497
Tssr131450 15 63611447 to 63611471 24 + TSS region transcription start site region 131450
Gm5473 15 63631697 to 63632338 641 + pseudogene predicted pseudogene 5473
Tssr134498 15 63647890 to 63647904 14 - TSS region transcription start site region 134498
Tssr134499 15 63649119 to 63649129 10 - TSS region transcription start site region 134499
Tssr134500 15 63718246 to 63718292 46 - TSS region transcription start site region 134500
4930449C09Rik 15 63718318 to 63737296 18978 + lincRNA gene RIKEN cDNA 4930449C09 gene
Tssr131451 15 63718341 to 63718373 32 + TSS region transcription start site region 131451
Gm41336 15 63740669 to 63745351 4682 + lincRNA gene predicted gene, 41336
Gm49019 15 63751659 to 63755435 3776 + lincRNA gene predicted gene, 49019
Gm46499 15 63760161 to 63760580 419 + pseudogene predicted gene, 46499
Gsdmc 15 63775971 to 63808739 32768 - protein coding gene gasdermin C
Tssr134501 15 63808733 to 63808745 12 - TSS region transcription start site region 134501
Tssr134502 15 63808747 to 63808752 5 - TSS region transcription start site region 134502
Tssr4609 15 63814339 to 63814360 21 - TSS region transcription start site region 4609
1700065I16Rik 15 63817188 to 63819540 2352 + pseudogene RIKEN cDNA 1700065I16 gene
Gsdmc2 15 63824346 to 63845177 20831 - protein coding gene gasdermin C2
Gsdmcl1 15 63847309 to 63850942 3633 + pseudogene gasdermin C-like 1
Gsdmc3 15 63857724 to 63878558 20834 - protein coding gene gasdermin C3
Tssr4610 15 63878548 to 63878549 1 - TSS region transcription start site region 4610
Gsdmcl2 15 63880707 to 63889073 8366 + pseudogene gasdermin C-like 2
Gsdmc4 15 63891264 to 63912297 21033 - protein coding gene gasdermin C4
Tssr134503 15 63912287 to 63912297 10 - TSS region transcription start site region 134503
Gsdmcl-ps 15 63914461 to 63925453 10992 + pseudogene gasdermin C-like, pseudogene
Fam49b 15 63929094 to 64060452 131358 - protein coding gene family with sequence similarity 49, member B
Tssr134504 15 63943261 to 63943308 47 - TSS region transcription start site region 134504
Tssr134505 15 63963665 to 63963679 14 - TSS region transcription start site region 134505
Tssr134506 15 63975451 to 63975455 4 - TSS region transcription start site region 134506
Tssr134507 15 63985528 to 63985532 4 - TSS region transcription start site region 134507
Tssr134508 15 63990618 to 63990621 3 - TSS region transcription start site region 134508
Cpgi7135 15 63997434 to 63998804 1370 CpG island CpG island 7135
Tssr134509 15 63998043 to 63998054 11 - TSS region transcription start site region 134509
Tssr134510 15 63998071 to 63998101 30 - TSS region transcription start site region 134510
Tssr4611 15 63998135 to 63998138 3 - TSS region transcription start site region 4611
Tssr134511 15 63998174 to 63998185 11 - TSS region transcription start site region 134511
Tssr134512 15 64012829 to 64012836 7 - TSS region transcription start site region 134512
Tssr134513 15 64015524 to 64015540 16 - TSS region transcription start site region 134513
Tssr134514 15 64022989 to 64022993 4 - TSS region transcription start site region 134514
Tssr131452 15 64024087 to 64024094 7 + TSS region transcription start site region 131452
Gm25628 15 64025948 to 64026052 104 + snRNA gene predicted gene, 25628
A230048O21Rik 15 64027262 to 64030952 3690 unclassified gene RIKEN cDNA A230048O21 gene
Tssr131453 15 64055373 to 64055386 13 + TSS region transcription start site region 131453
Tssr134515 15 64058998 to 64059001 3 - TSS region transcription start site region 134515
Cpgi7136 15 64059555 to 64060956 1401 CpG island CpG island 7136
Tssr134516 15 64059782 to 64059786 4 - TSS region transcription start site region 134516
Tssr134517 15 64060218 to 64060278 60 - TSS region transcription start site region 134517
Tssr134518 15 64060309 to 64060318 9 - TSS region transcription start site region 134518
Tssr134519 15 64060327 to 64060435 108 - TSS region transcription start site region 134519
Tssr134520 15 64060439 to 64060478 39 - TSS region transcription start site region 134520
Tssr134521 15 64060676 to 64060690 14 - TSS region transcription start site region 134521
Asap1 15 64086857 to 64382919 296062 - protein coding gene ArfGAP with SH3 domain, ankyrin repeat and PH domain1
Tssr134522 15 64095339 to 64095341 2 - TSS region transcription start site region 134522
Tssr131454 15 64098316 to 64098351 35 + TSS region transcription start site region 131454
Gm20717 15 64098317 to 64101397 3080 + antisense lncRNA gene predicted gene 20717
Tssr134523 15 64110988 to 64111003 15 - TSS region transcription start site region 134523
Tssr134524 15 64133247 to 64133264 17 - TSS region transcription start site region 134524
Tssr134525 15 64135803 to 64135806 3 - TSS region transcription start site region 134525
Tssr134526 15 64156259 to 64156264 5 - TSS region transcription start site region 134526
Tssr131455 15 64173270 to 64173278 8 + TSS region transcription start site region 131455
Tssr134527 15 64182423 to 64182428 5 - TSS region transcription start site region 134527
Tssr131456 15 64220503 to 64220508 5 + TSS region transcription start site region 131456
Tssr134528 15 64242690 to 64242698 8 - TSS region transcription start site region 134528
Tssr134529 15 64285288 to 64285296 8 - TSS region transcription start site region 134529
Tssr134530 15 64303182 to 64303187 5 - TSS region transcription start site region 134530
Tssr134531 15 64304952 to 64304970 18 - TSS region transcription start site region 134531
Tssr134532 15 64304996 to 64305018 22 - TSS region transcription start site region 134532
Cpgi7137 15 64311779 to 64313251 1472 CpG island CpG island 7137
Tssr134533 15 64312492 to 64312508 16 - TSS region transcription start site region 134533
Tssr134534 15 64312513 to 64312539 26 - TSS region transcription start site region 134534
Tssr134535 15 64312546 to 64312584 38 - TSS region transcription start site region 134535
Tssr134536 15 64312604 to 64312630 26 - TSS region transcription start site region 134536
Tssr134537 15 64312636 to 64312692 56 - TSS region transcription start site region 134537
Tssr134538 15 64312793 to 64312814 21 - TSS region transcription start site region 134538
1700010G06Rik 15 64314497 to 64316076 1579 + antisense lncRNA gene RIKEN cDNA 1700010G06 gene
Gm10926 15 64328028 to 64329017 989 - unclassified non-coding RNA gene predicted gene 10926
Cpgi7138 15 64382151 to 64383262 1111 CpG island CpG island 7138
Tssr134539 15 64382736 to 64382845 109 - TSS region transcription start site region 134539
Tssr134540 15 64382908 to 64382936 28 - TSS region transcription start site region 134540
Tssr134541 15 64382937 to 64382958 21 - TSS region transcription start site region 134541
Tssr134542 15 64383023 to 64383035 12 - TSS region transcription start site region 134542
Tssr134543 15 64383039 to 64383069 30 - TSS region transcription start site region 134543
Tssr134544 15 64383076 to 64383087 11 - TSS region transcription start site region 134544
Gm30563 15 64396379 to 64433598 37219 + lincRNA gene predicted gene, 30563
D15Mit122 15 64434485 to 64434630 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 122
Hfib1 15 64434485 to 64434630 145 QTL hepatic fibrogenesis 1
Gm46509 15 64503053 to 64503554 501 - lncRNA gene predicted gene, 46509
Gm30632 15 64534004 to 64572818 38814 + lncRNA gene predicted gene, 30632
Gct3 15 64537747 to 64537842 95 QTL granulosa cell tumorigenesis 3
D15Mit133 15 64537747 to 64537842 95 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 133
Tssr134545 15 64571164 to 64571168 4 - TSS region transcription start site region 134545
Tssr131457 15 64613791 to 64613806 15 + TSS region transcription start site region 131457
Gm30691 15 64627441 to 64630705 3264 - lincRNA gene predicted gene, 30691
Adcy8 15 64699035 to 64922296 223261 - protein coding gene adenylate cyclase 8
Gm30752 15 64798244 to 64813532 15288 + lncRNA gene predicted gene, 30752
Gm21798 15 64817694 to 64937996 120302 + protein coding gene predicted gene, 21798
Bhr2 15 103517472 to 64434485 -39082987 QTL bronchial hyperresponsiveness 2