MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:103004008-103027429

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hoxc6	15	102998257 to 103011881	13624	+	protein coding gene	homeobox C6
Cpgi7860	15	103005440 to 103005671	231		CpG island	CpG island 7860
Tssr133502	15	103009481 to 103009507	26	+	TSS region	transcription start site region 133502
Tssr133503	15	103009517 to 103009544	27	+	TSS region	transcription start site region 133503
Tssr133504	15	103009545 to 103009558	13	+	TSS region	transcription start site region 133504
Cpgi7861	15	103009655 to 103009854	199		CpG island	CpG island 7861
Tssr133505	15	103010127 to 103010140	13	+	TSS region	transcription start site region 133505
Cpgi7862	15	103010615 to 103010897	282		CpG island	CpG island 7862
Tssr133506	15	103014000 to 103014014	14	+	TSS region	transcription start site region 133506
Hoxc5	15	103014008 to 103017429	3421	+	protein coding gene	homeobox C5
Tssr133507	15	103014129 to 103014145	16	+	TSS region	transcription start site region 133507
Cpgi7863	15	103014156 to 103014589	433		CpG island	CpG island 7863
Tssr4743	15	103014337 to 103014368	31	+	TSS region	transcription start site region 4743
Tssr133508	15	103014370 to 103014389	19	+	TSS region	transcription start site region 133508
Cpgi7864	15	103014852 to 103015336	484		CpG island	CpG island 7864
Mir615	15	103014910 to 103015001	91	+	miRNA gene	microRNA 615
Hoxc4	15	103018934 to 103036852	17918	+	protein coding gene	homeobox C4
Tssr133509	15	103018964 to 103018973	9	+	TSS region	transcription start site region 133509
Gm30528	15	103026807 to 103063780	36973	-	lncRNA gene	predicted gene, 30528