Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:8315517-9285519

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam107a 14 8296270 to 8318018 21748 - protein coding gene family with sequence similarity 107, member A
C530034L13Rik 14 8317163 to 8319868 2705 unclassified gene RIKEN cDNA C530034L13 gene
Cpgi6159 14 8317170 to 8317796 626 CpG island CpG island 6159
Tssr127419 14 8317596 to 8317604 8 - TSS region transcription start site region 127419
Tssr127420 14 8317613 to 8317627 14 - TSS region transcription start site region 127420
Tssr127421 14 8317818 to 8317829 11 - TSS region transcription start site region 127421
Tssr127422 14 8317858 to 8317881 23 - TSS region transcription start site region 127422
Tssr127423 14 8318033 to 8318054 21 - TSS region transcription start site region 127423
Tssr124244 14 8332446 to 8332453 7 + TSS region transcription start site region 124244
Oit1 14 8348937 to 8378754 29817 - protein coding gene oncoprotein induced transcript 1
Tssr127424 14 8360339 to 8360362 23 - TSS region transcription start site region 127424
Tssr127425 14 8367246 to 8367257 11 - TSS region transcription start site region 127425
Tssr127426 14 8367261 to 8367280 19 - TSS region transcription start site region 127426
Tssr127427 14 8367281 to 8367297 16 - TSS region transcription start site region 127427
Tssr124245 14 8367370 to 8367390 20 + TSS region transcription start site region 124245
Tssr124246 14 8367412 to 8367419 7 + TSS region transcription start site region 124246
2610318M16Rik 14 8367440 to 8371010 3570 + antisense lncRNA gene RIKEN cDNA 2610318M16 gene
Tssr127428 14 8368120 to 8368136 16 - TSS region transcription start site region 127428
Tssr127429 14 8368149 to 8368157 8 - TSS region transcription start site region 127429
Tssr124247 14 8368235 to 8368255 20 + TSS region transcription start site region 124247
Tssr124248 14 8368256 to 8368265 9 + TSS region transcription start site region 124248
Tssr124249 14 8368272 to 8368281 9 + TSS region transcription start site region 124249
Tssr127430 14 8378700 to 8378705 5 - TSS region transcription start site region 127430
Tssr127431 14 8378727 to 8378751 24 - TSS region transcription start site region 127431
Tssr127432 14 8378753 to 8378804 51 - TSS region transcription start site region 127432
Tssr127433 14 8378821 to 8378846 25 - TSS region transcription start site region 127433
Tssr127434 14 8378851 to 8378870 19 - TSS region transcription start site region 127434
Tssr127435 14 8378890 to 8378897 7 - TSS region transcription start site region 127435
Tssr127436 14 8378899 to 8378923 24 - TSS region transcription start site region 127436
Gm41095 14 8379105 to 8449034 69929 + lncRNA gene predicted gene, 41095
Gm8416 14 8408915 to 8410193 1278 + pseudogene predicted gene 8416
4930452B06Rik 14 8431192 to 8666240 235048 - protein coding gene RIKEN cDNA 4930452B06 gene
Gm46492 14 8464268 to 8466922 2654 + lncRNA gene predicted gene, 46492
D14Mit179 14 8513657 to 8513800 143 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 179
Tssr124250 14 8610332 to 8610366 34 + TSS region transcription start site region 124250
Tssr124251 14 8615909 to 8615913 4 + TSS region transcription start site region 124251
Cpgi6160 14 8665926 to 8666481 555 CpG island CpG island 6160
Tssr127437 14 8666203 to 8666235 32 - TSS region transcription start site region 127437
Tssr127438 14 8666236 to 8666279 43 - TSS region transcription start site region 127438
Tssr124252 14 8666349 to 8666360 11 + TSS region transcription start site region 124252
Tssr124253 14 8666369 to 8666413 44 + TSS region transcription start site region 124253
4930455B14Rik 14 8666390 to 8673378 6988 + lincRNA gene RIKEN cDNA 4930455B14 gene
Gm20241 14 8687419 to 8687909 490 + pseudogene predicted gene, 20241
Gm9800 14 8800000 to 8800335 335 - pseudogene predicted gene 9800
Tssr127439 14 8800517 to 8800519 2 - TSS region transcription start site region 127439
Gm48364 14 8858989 to 8860050 1061 - pseudogene predicted gene, 48364
Gm18071 14 8925472 to 8926180 708 - pseudogene predicted gene, 18071
Tssr124254 14 9156970 to 9156972 2 + TSS region transcription start site region 124254