Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:57789543-57990715

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Modor2 14 24925824 to 57942312 33016488 QTL modifier of ocular retardation 2
Cpgi6547 14 57797946 to 57799041 1095 CpG island CpG island 6547
Tssr125877 14 57798156 to 57798180 24 + TSS region transcription start site region 125877
Tssr125878 14 57798182 to 57798216 34 + TSS region transcription start site region 125878
Sap18 14 57798189 to 57804980 6791 + protein coding gene Sin3-associated polypeptide 18
Mir3077 14 57798424 to 57798487 63 + miRNA gene microRNA 3077
Tssr125879 14 57798620 to 57798629 9 + TSS region transcription start site region 125879
Tssr125880 14 57798637 to 57798696 59 + TSS region transcription start site region 125880
Tssr125881 14 57798699 to 57798708 9 + TSS region transcription start site region 125881
Ska3 14 57806561 to 57826185 19624 - protein coding gene spindle and kinetochore associated complex subunit 3
Cpgi6548 14 57825778 to 57826886 1108 CpG island CpG island 6548
Tssr128978 14 57826128 to 57826180 52 - TSS region transcription start site region 128978
Tssr128979 14 57826185 to 57826203 18 - TSS region transcription start site region 128979
Tssr125882 14 57826210 to 57826272 62 + TSS region transcription start site region 125882
Mrpl57 14 57826228 to 57829087 2859 + protein coding gene mitochondrial ribosomal protein L57
Tssr125883 14 57826371 to 57826417 46 + TSS region transcription start site region 125883
Gm22738 14 57831063 to 57831209 146 - snRNA gene predicted gene, 22738
Zdhhc20 14 57832703 to 57890276 57573 - protein coding gene zinc finger, DHHC domain containing 20
Tssr128980 14 57847148 to 57847155 7 - TSS region transcription start site region 128980
Tssr128981 14 57849090 to 57849094 4 - TSS region transcription start site region 128981
Tssr125884 14 57878415 to 57878422 7 + TSS region transcription start site region 125884
Cpgi6549 14 57889543 to 57890715 1172 CpG island CpG island 6549
Tssr125885 14 57889780 to 57889792 12 + TSS region transcription start site region 125885
Tssr125886 14 57889811 to 57889846 35 + TSS region transcription start site region 125886
Tssr125887 14 57889990 to 57889999 9 + TSS region transcription start site region 125887
Tssr128982 14 57890184 to 57890239 55 - TSS region transcription start site region 128982
Tssr128983 14 57890242 to 57890320 78 - TSS region transcription start site region 128983
Cpgi6550 14 57910608 to 57910884 276 CpG island CpG island 6550
Micu2 14 57916261 to 57999262 83001 - protein coding gene mitochondrial calcium uptake 2
Tssr128984 14 57916609 to 57916618 9 - TSS region transcription start site region 128984
Tssr128985 14 57925392 to 57925422 30 - TSS region transcription start site region 128985
Tssr128986 14 57925465 to 57925484 19 - TSS region transcription start site region 128986
D14Mit154 14 57942183 to 57942312 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 154
wrmod1 14 101622037 to 57942183 -43679854 QTL wobbler modifier 1