Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:52418652-52660876

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41151 14 52393269 to 52420501 27232 + lncRNA gene predicted gene, 41151
Gm43250 14 52420556 to 52420828 272 + pseudogene predicted gene 43250
Tssr125461 14 52427931 to 52427952 21 + TSS region transcription start site region 125461
Tcra 14 52427967 to 54224198 1796231 + complex/cluster/region T cell receptor alpha chain
Trav1 14 52427967 to 52428876 909 + gene segment T cell receptor alpha variable 1
Tssr125462 14 52437078 to 52437087 9 + TSS region transcription start site region 125462
Tssr125463 14 52437107 to 52437116 9 + TSS region transcription start site region 125463
Olfr1509 14 52450393 to 52451402 1009 + protein coding gene olfactory receptor 1509
Olfr1508 14 52462721 to 52467461 4740 - protein coding gene olfactory receptor 1508
Gm43512 14 52482885 to 52483060 175 - pseudogene predicted gene 43512
Olfr1507 14 52489935 to 52495695 5760 - protein coding gene olfactory receptor 1507
Gm9537 14 52508286 to 52518788 10502 + pseudogene predicted gene 9537
Gm36382 14 52508542 to 52509082 540 - pseudogene predicted gene, 36382
Gm36448 14 52538652 to 52540876 2224 - pseudogene predicted gene, 36448
Gm7122 14 52538652 to 52540876 2224 + pseudogene predicted pseudogene 7122
Tssr125464 14 52567182 to 52567203 21 + TSS region transcription start site region 125464
Trav2 14 52567293 to 52568053 760 + gene segment T cell receptor alpha variable 2
Tssr125465 14 52580584 to 52580590 6 + TSS region transcription start site region 125465
Trav3-1 14 52580762 to 52581213 451 + gene segment T cell receptor alpha variable 3-1
Trav4-1 14 52607307 to 52607804 497 + pseudogenic gene segment T cell receptor alpha variable 4-1
Tssr4407 14 52610356 to 52610364 8 + TSS region transcription start site region 4407
Tssr125466 14 52622496 to 52622518 22 + TSS region transcription start site region 125466
Tssr125467 14 52622524 to 52622535 11 + TSS region transcription start site region 125467
Trav5-1 14 52622566 to 52623082 516 + gene segment T cell receptor alpha variable 5-1
Tssr125468 14 52622573 to 52622586 13 + TSS region transcription start site region 125468
Tssr4408 14 52623833 to 52623834 1 + TSS region transcription start site region 4408
Tssr125469 14 52638452 to 52638472 20 + TSS region transcription start site region 125469
Trav6-1 14 52638515 to 52638962 447 + gene segment T cell receptor alpha variable 6-1
Gm42988 14 52639531 to 52639755 224 + pseudogene predicted gene 42988
Tssr125470 14 52654658 to 52654674 16 + TSS region transcription start site region 125470
Trav7-1 14 52654817 to 52655328 511 + gene segment T cell receptor alpha variable 7-1