Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:42992954-49784450

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701 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mrdq4 14 12546018 to 48527625 35981607 QTL modifier of retinal degeneration QTL 4
A930006J02Rik 14 25143367 to 48778390 23635023 unclassified non-coding RNA gene RIKEN cDNA A930006J02 gene
Gm8082 14 42991226 to 42993494 2268 - protein coding gene predicted gene 8082
Gm3111 14 43000499 to 43002836 2337 - pseudogene predicted gene 3111
Gm10376 14 43013135 to 43015649 2514 - protein coding gene predicted gene 10376
Gm6536 14 43042970 to 43045946 2976 + pseudogene predicted gene 6536
Gm3123 14 43060214 to 43062467 2253 - pseudogene predicted gene 3123
Gm8094 14 43071142 to 43076643 5501 - protein coding gene predicted gene 8094
Gm49873 14 43089445 to 43109217 19772 + pseudogene predicted gene, 49873
Gm8104 14 43100601 to 43115190 14589 + protein coding gene predicted gene 8104
Cdv3-ps 14 43120937 to 43122471 1534 - pseudogene Cdv3 retrotransposed pseudogene
Tssr128215 14 43121155 to 43121158 3 - TSS region transcription start site region 128215
Gm49135 14 43131404 to 43146687 15283 + lincRNA gene predicted gene, 49135
Gm8114 14 43133466 to 43135689 2223 - pseudogene predicted gene 8114
Gm3141 14 43147487 to 43149893 2406 - pseudogene predicted gene 3141
Gm49141 14 43168628 to 43178007 9379 + pseudogene predicted gene, 49141
Gm7233 14 43179867 to 43187988 8121 + protein coding gene predicted gene 7233
Gm7316 14 43211909 to 43214147 2238 - pseudogene predicted gene 7316
Gm8122 14 43229832 to 43235304 5472 - protein coding gene predicted gene 8122
Gm49146 14 43250590 to 43258804 8214 + pseudogene predicted gene, 49146
Gm8126 14 43258649 to 43266799 8150 + protein coding gene predicted gene 8126
Gm9732 14 43274931 to 43305673 30742 + protein coding gene predicted gene 9732
Gm17153 14 43277419 to 43279645 2226 - pseudogene predicted gene 17153
Gm8127 14 43288288 to 43293803 5515 - protein coding gene predicted gene 8127
Gm17155 14 43318175 to 43320397 2222 - pseudogene predicted gene 17155
Gm17154 14 43332701 to 43334975 2274 - pseudogene predicted gene 17154
1700001F09Rik 14 43342384 to 43347811 5427 - protein coding gene RIKEN cDNA 1700001F09 gene
Gm9597 14 43386214 to 43394024 7810 + pseudogene predicted gene 9597
Gm49315 14 43399151 to 43400147 996 - pseudogene predicted gene, 49315
Gm8138 14 43410827 to 43416350 5523 - protein coding gene predicted gene 8138
Gm41136 14 43497580 to 43542453 44873 + lncRNA gene predicted gene, 41136
Gm49072 14 43500011 to 43501007 996 - pseudogene predicted gene, 49072
Gm21162 14 43513572 to 43517207 3635 - protein coding gene predicted gene, 21162
Gm5799 14 43543631 to 43550708 7077 + protein coding gene predicted gene 5799
Gm3216 14 43562300 to 43564547 2247 - pseudogene predicted gene 3216
Gm17654 14 43576734 to 43579012 2278 - protein coding gene predicted gene, 17654
Gm3221 14 43593005 to 43595276 2271 - pseudogene predicted gene 3221
Gm10375 14 43602627 to 43608013 5386 - protein coding gene predicted gene 10375
Gm8046 14 43635674 to 43638776 3102 + pseudogene predicted gene 8046
Gm21154 14 43646251 to 43673065 26814 + lincRNA gene predicted gene, 21154
Gm8161 14 43653029 to 43655027 1998 - pseudogene predicted gene 8161
Gm8165 14 43672650 to 43677460 4810 - protein coding gene predicted gene 8165
Gm9672 14 43700269 to 43702426 2157 - pseudogene predicted gene 9672
Gm17208 14 43713383 to 43715579 2196 + pseudogene predicted gene 17208
Tssr125194 14 43713729 to 43713737 8 + TSS region transcription start site region 125194
Gm7324 14 43713734 to 43715370 1636 + pseudogene predicted gene 7324
Gm16506 14 43725102 to 43727355 2253 - protein coding gene predicted gene 16506
Gm49078 14 43730063 to 43731362 1299 + pseudogene predicted gene, 49078
Cpgi6353 14 43736196 to 43736389 193 CpG island CpG island 6353
Gm49080 14 43736459 to 43736660 201 + pseudogene predicted gene, 49080
Gm6526 14 43747866 to 43755948 8082 + protein coding gene predicted gene 6526
Gm49965 14 43762152 to 43909143 146991 + lincRNA gene predicted gene, 49965
Gm41139 14 43766370 to 43777107 10737 + lncRNA gene predicted gene, 41139
Gm9587 14 43768934 to 43771115 2181 - pseudogene predicted gene 9587
Gm8180 14 43782319 to 43784616 2297 - protein coding gene predicted gene 8180
Gm49082 14 43787317 to 43788616 1299 + pseudogene predicted gene, 49082
D14Mit255a 14 43796151 to 43796269 118 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 255a
Cpgi6354 14 43796892 to 43797135 243 CpG island CpG island 6354
Gm49081 14 43797289 to 43797490 201 + pseudogene predicted gene, 49081
Gm41138 14 43798448 to 43800720 2272 - lincRNA gene predicted gene, 41138
Gm49083 14 43804696 to 43812383 7687 - lincRNA gene predicted gene, 49083
Gm32427 14 43818408 to 43829572 11164 + lncRNA gene predicted gene, 32427
Ear1 14 43818765 to 43819639 874 - protein coding gene eosinophil-associated, ribonuclease A family, member 1
Ear-ps12 14 43853729 to 43854179 450 - pseudogene eosinophil-associated, ribonuclease A family, pseudogene 12
Tssr125195 14 43857502 to 43857509 7 + TSS region transcription start site region 125195
Ang-ps2 14 43864917 to 43865349 432 + pseudogene angiogenin, ribonuclease A family, pseudogene 2
Gm32537 14 43874360 to 43885462 11102 + lncRNA gene predicted gene, 32537
Ear-ps9 14 43874691 to 43875339 648 - pseudogene eosinophil-associated, ribonuclease A family, pseudogene 9
Ear-ps8 14 43901685 to 43902038 353 - pseudogene eosinophil-associated, ribonuclease A family, pseudogene 8
Ang-ps3 14 43912992 to 43913424 432 + pseudogene angiogenin, ribonuclease A family, pseudogene 3
Ear10 14 43922898 to 43923368 470 - protein coding gene eosinophil-associated, ribonuclease A family, member 10
Tssr128216 14 43923592 to 43923598 6 - TSS region transcription start site region 128216
Tssr125196 14 43925334 to 43925348 14 + TSS region transcription start site region 125196
Gm8113 14 43925390 to 43933411 8021 + protein coding gene predicted gene 8113
Gm32482 14 43935583 to 43937685 2102 + lncRNA gene predicted gene, 32482
Gm9550 14 43940997 to 43941858 861 + pseudogene predicted gene 9550
Ang5 14 43957069 to 43963072 6003 + protein coding gene angiogenin, ribonuclease A family, member 5
Ear-ps7 14 43969077 to 43969518 441 - pseudogene eosinophil-associated, ribonuclease A family, pseudogene 7
Gm49087 14 43979713 to 43987466 7753 - lincRNA gene predicted gene, 49087
Ear-ps10 14 43991714 to 43992173 459 + pseudogene eosinophil-associated, ribonuclease A family, pseudogene 10
Ang6 14 44001826 to 44002269 443 - protein coding gene angiogenin, ribonuclease A family, member 6
Gm8194 14 44021600 to 44022458 858 - pseudogene predicted gene 8194
Gm3287 14 44026002 to 44037526 11524 - lincRNA gene predicted gene 3287
Gm46451 14 44044081 to 44048134 4053 - lncRNA gene predicted gene, 46451
Ear-ps2 14 44046985 to 44047450 465 + pseudogene eosinophil-associated, ribonuclease A family, pseudogene 2
Ang-ps1 14 44056983 to 44057418 435 - pseudogene angiogenin, ribonuclease A family, pseudogene 1
Gm49099 14 44074083 to 44075921 1838 - lincRNA gene predicted gene, 49099
Gm16545 14 44074561 to 44075023 462 + pseudogene predicted gene 16545
Gm49101 14 44092634 to 44103915 11281 - lincRNA gene predicted gene, 49101
Ear2 14 44102654 to 44103531 877 + protein coding gene eosinophil-associated, ribonuclease A family, member 2
Tssr125197 14 44102655 to 44102665 10 + TSS region transcription start site region 125197
Gm49102 14 44113360 to 44117887 4527 + pseudogene predicted gene, 49102
Gm49103 14 44116576 to 44116777 201 - pseudogene predicted gene, 49103
Gm18216 14 44120072 to 44121253 1181 - pseudogene predicted gene, 18216
Gm3327 14 44123980 to 44126287 2307 + protein coding gene predicted gene 3327
Gm8207 14 44138385 to 44140545 2160 + pseudogene predicted gene 8207
4930503E14Rik 14 44163061 to 44172602 9541 - protein coding gene RIKEN cDNA 4930503E14 gene
1700047E10Rik 14 44191607 to 44213237 21630 - antisense lncRNA gene RIKEN cDNA 1700047E10 gene
Gm8212 14 44197506 to 44201566 4060 + protein coding gene predicted gene 8212
Gm49104 14 44210608 to 44210861 253 + pseudogene predicted gene, 49104
Gm32857 14 44226217 to 44315511 89294 - lincRNA gene predicted gene, 32857
Gm49110 14 44230931 to 44231161 230 - pseudogene predicted gene, 49110
Cpgi6355 14 44248063 to 44248217 154 CpG island CpG island 6355
Tssr4378 14 44256188 to 44256191 3 + TSS region transcription start site region 4378
Gm6532 14 44265044 to 44265602 558 + pseudogene predicted pseudogene 6532
Gm49111 14 44275579 to 44275796 217 - pseudogene predicted gene, 49111
Gm8220 14 44285590 to 44291058 5468 + protein coding gene predicted gene 8220
Gm49109 14 44306134 to 44306443 309 - pseudogene predicted gene, 49109
Gm8224 14 44307689 to 44309906 2217 + pseudogene predicted gene 8224
Gm5930 14 44330442 to 44338584 8142 - protein coding gene predicted gene 5930
Gm8229 14 44365357 to 44370841 5484 + protein coding gene predicted gene 8229
Gm3370 14 44379870 to 44382093 2223 + pseudogene predicted gene 3370
Gm3371 14 44402671 to 44410688 8017 - protein coding gene predicted gene 3371
Gm8232 14 44433563 to 44438946 5383 + protein coding gene predicted gene 8232
Gm49779 14 44440402 to 44452387 11985 - lincRNA gene predicted gene, 49779
Gm21991 14 44447792 to 44450009 2217 + pseudogene predicted gene 21991
Gm17184 14 44472516 to 44535359 62843 - pseudogene predicted gene 17184
BC061237 14 44500122 to 44506345 6223 + protein coding gene cDNA sequence BC061237
Tssr4379 14 44500160 to 44500174 14 + TSS region transcription start site region 4379
Gm17093 14 44518276 to 44523444 5168 + protein coding gene predicted gene 17093
Gm17183 14 44530797 to 44533002 2205 + pseudogene predicted gene 17183
Gm5624 14 44556795 to 44627938 71143 - protein coding gene predicted gene 5624
Gm8247 14 44583282 to 44585558 2276 + protein coding gene predicted gene 8247
Gm16439 14 44596665 to 44597228 563 + pseudogene predicted pseudogene 16439
Gm8256 14 44613568 to 44618896 5328 + pseudogene predicted gene 8256
Gm9593 14 44623288 to 44625490 2202 + pseudogene predicted gene 9593
Gm8257 14 44649532 to 44657357 7825 - protein coding gene predicted pseudogene 8257
Gm21754 14 44687491 to 44689874 2383 + pseudogene predicted gene, 21754
Gm6541 14 44701858 to 44704087 2229 + pseudogene predicted gene 6541
Gm8267 14 44717167 to 44724987 7820 - protein coding gene predicted gene 8267
Gm34060 14 44750397 to 44765684 15287 + lincRNA gene predicted gene, 34060
Gm49142 14 44753446 to 44753631 185 + pseudogene predicted gene, 49142
Gm41141 14 44758109 to 44761831 3722 - lncRNA gene predicted gene, 41141
Tssr128217 14 44772461 to 44772466 5 - TSS region transcription start site region 128217
Gm17187 14 44777463 to 44779762 2299 + pseudogene predicted gene 17187
Gm49143 14 44782571 to 44783601 1030 - pseudogene predicted gene, 49143
Tssr128218 14 44789935 to 44789940 5 - TSS region transcription start site region 128218
Gm17070 14 44804701 to 44805484 783 - pseudogene predicted gene 17070
Gm49145 14 44821886 to 44834142 12256 + lincRNA gene predicted gene, 49145
Gm34198 14 44846050 to 44846350 300 + lncRNA gene predicted gene, 34198
Ptgdr 14 44851235 to 44859375 8140 - protein coding gene prostaglandin D receptor
Cpgi6356 14 44858755 to 44859338 583 CpG island CpG island 6356
Gm16976 14 44858954 to 44974953 115999 + unclassified non-coding RNA gene predicted gene, 16976
Tssr128219 14 44859348 to 44859364 16 - TSS region transcription start site region 128219
Tssr128220 14 44859370 to 44859381 11 - TSS region transcription start site region 128220
Gm18524 14 44905748 to 44906516 768 + pseudogene predicted gene, 18524
Tssr125198 14 44926818 to 44926824 6 + TSS region transcription start site region 125198
Gm49148 14 44933163 to 44934206 1043 + pseudogene predicted gene, 49148
Gm49147 14 44939102 to 44939266 164 - pseudogene predicted gene, 49147
Gm41142 14 44944488 to 44957540 13052 + lncRNA gene predicted gene, 41142
Mir327 14 44947443 to 44947511 68 - miRNA gene microRNA 327
4930431P03Rik 14 44955215 to 44961326 6111 - lncRNA gene RIKEN cDNA 4930431P03 gene
Gm49364 14 44955217 to 44989699 34482 - unclassified non-coding RNA gene predicted gene, 49364
Gm17173 14 44972268 to 45006900 34632 - antisense lncRNA gene predicted gene 17173
Tssr125199 14 44988164 to 44988178 14 + TSS region transcription start site region 125199
Tssr125200 14 44988192 to 44988203 11 + TSS region transcription start site region 125200
Ptger2 14 44988195 to 45003820 15625 + protein coding gene prostaglandin E receptor 2 (subtype EP2)
Tssr125201 14 44988456 to 44988472 16 + TSS region transcription start site region 125201
Tssr125202 14 44988576 to 44988611 35 + TSS region transcription start site region 125202
Tssr125203 14 44988653 to 44988672 19 + TSS region transcription start site region 125203
Cpgi6357 14 44988725 to 44989852 1127 CpG island CpG island 6357
Tssr4380 14 44988768 to 44988812 44 - TSS region transcription start site region 4380
Tssr125204 14 44988896 to 44988919 23 + TSS region transcription start site region 125204
Tssr128221 14 44989673 to 44989679 6 - TSS region transcription start site region 128221
Tssr128222 14 44989850 to 44989870 20 - TSS region transcription start site region 128222
Tssr128223 14 44989902 to 44989926 24 - TSS region transcription start site region 128223
Tssr125205 14 44997170 to 44997191 21 + TSS region transcription start site region 125205
Tssr125206 14 45038177 to 45038179 2 + TSS region transcription start site region 125206
Tssr128224 14 45041198 to 45041222 24 - TSS region transcription start site region 128224
Gm49180 14 45056497 to 45102094 45597 - lincRNA gene predicted gene, 49180
Gm21010 14 45090615 to 45091900 1285 + pseudogene predicted gene, 21010
Tssr128225 14 45102327 to 45102356 29 - TSS region transcription start site region 128225
Gm49181 14 45113704 to 45114112 408 - pseudogene predicted gene, 49181
Gm49183 14 45114401 to 45114708 307 - pseudogene predicted gene, 49183
Gm49184 14 45130034 to 45130384 350 + pseudogene predicted gene, 49184
Txndc16 14 45134448 to 45219538 85090 - protein coding gene thioredoxin domain containing 16
Tssr125207 14 45155739 to 45155746 7 + TSS region transcription start site region 125207
Tssr125208 14 45155818 to 45155843 25 + TSS region transcription start site region 125208
Tssr128226 14 45158447 to 45158450 3 - TSS region transcription start site region 128226
Tssr128227 14 45173583 to 45173612 29 - TSS region transcription start site region 128227
Gm34362 14 45175038 to 45176705 1667 - protein coding gene predicted gene, 34362
Gm15765 14 45211523 to 45212432 909 + pseudogene predicted gene 15765
Tssr128228 14 45218983 to 45218997 14 - TSS region transcription start site region 128228
Cpgi6358 14 45218993 to 45220991 1998 CpG island CpG island 6358
Tssr128229 14 45219246 to 45219257 11 - TSS region transcription start site region 128229
Tssr128230 14 45219273 to 45219308 35 - TSS region transcription start site region 128230
Tssr128231 14 45219334 to 45219345 11 - TSS region transcription start site region 128231
Tssr128232 14 45219364 to 45219428 64 - TSS region transcription start site region 128232
Tssr128233 14 45219435 to 45219446 11 - TSS region transcription start site region 128233
Tssr125209 14 45219711 to 45219725 14 + TSS region transcription start site region 125209
Gpr137c 14 45219717 to 45282725 63008 + protein coding gene G protein-coupled receptor 137C
Tssr125210 14 45219744 to 45219775 31 + TSS region transcription start site region 125210
Tssr128234 14 45220741 to 45220761 20 - TSS region transcription start site region 128234
Tssr128235 14 45270197 to 45270205 8 - TSS region transcription start site region 128235
Gm49194 14 45273250 to 45274723 1473 + sense intronic lncRNA gene predicted gene, 49194
Tssr125211 14 45276052 to 45276069 17 + TSS region transcription start site region 125211
Tssr4381 14 45276081 to 45276086 5 + TSS region transcription start site region 4381
Ero1l 14 45283087 to 45318572 35485 - protein coding gene ERO1-like (S. cerevisiae)
Tssr128236 14 45285353 to 45285366 13 - TSS region transcription start site region 128236
Tssr128237 14 45285929 to 45285971 42 - TSS region transcription start site region 128237