Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:41570417-43402658

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700049E17Rik2 14 41573211 to 41581305 8094 + protein coding gene tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2
Gm46479 14 41606468 to 41620385 13917 + lncRNA gene predicted gene, 46479
Gm17159 14 41608857 to 41611107 2250 - pseudogene predicted gene 17159
Gm3072 14 41622216 to 41624481 2265 - protein coding gene predicted gene 3072
Gm3077 14 41631680 to 41633816 2136 - pseudogene predicted gene 3077
Gm3676 14 41641179 to 41646487 5308 - protein coding gene predicted gene 3676
Gm8065 14 41673751 to 41676835 3084 + pseudogene predicted gene 8065
Gm8068 14 41696393 to 41701885 5492 - protein coding gene predicted gene 8068
Gm7929 14 41745917 to 41750614 4697 - protein coding gene predicted gene 7929
Gm47189 14 41767172 to 41772441 5269 - protein coding gene predicted gene, 47189
Gm17062 14 41889687 to 41892459 2772 - pseudogene predicted gene 17062
Gm7980 14 41902263 to 41907280 5017 - protein coding gene predicted gene 7980
1700049E17Rik1 14 41924949 to 41933041 8092 + protein coding gene RIKEN cDNA 1700049E17 gene, gene 1
1700024B05Rik 14 41943995 to 42003821 59826 + protein coding gene RIKEN cDNA 1700024B05 gene
Gm9890 14 41946433 to 41948671 2238 - pseudogene predicted gene 9890
Gm6401 14 41962708 to 41967927 5219 - protein coding gene predicted gene 6401
Gm3543 14 41977873 to 41983325 5452 - protein coding gene predicted gene 3543
1700016D02Rik 14 42023077 to 42036801 13724 unclassified gene RIKEN cDNA 1700016D02 gene
Gm17063 14 42025476 to 42027672 2196 - pseudogene predicted gene 17063
Gm2930 14 42037609 to 42040012 2403 - pseudogene predicted gene 2930
Gm7991 14 42067059 to 42070137 3078 + pseudogene predicted gene 7991
1700091H14Rik 14 42089750 to 42095277 5527 - lncRNA gene RIKEN cDNA 1700091H14 gene
Gm7951 14 42114803 to 42117238 2435 - protein coding gene predicted gene 7951
Gm41135 14 42124186 to 42129546 5360 - lncRNA gene predicted gene, 41135
Gm5376 14 42134452 to 42139693 5241 + unclassified gene predicted gene 5376
Gm17064 14 42145893 to 42148119 2226 - pseudogene predicted gene 17064
Gm17027 14 42160200 to 42162492 2292 - protein coding gene predicted gene 17027
Gm17166 14 42175704 to 42178006 2302 - pseudogene predicted gene 17166
Gm3573 14 42185391 to 42190791 5400 - protein coding gene predicted gene 3573
Gm17165 14 42218285 to 42220283 1998 + pseudogene predicted gene 17165
Gm46449 14 42227166 to 42232411 5245 - pseudogene predicted gene, 46449
Gm17038 14 42243217 to 42245444 2227 - pseudogene predicted gene 17038
Gm17026 14 42254659 to 42260048 5389 - protein coding gene predicted gene 17026
Gm25208 14 42274419 to 42274539 120 - miRNA gene predicted gene, 25208
Gm25892 14 42280342 to 42280462 120 - miRNA gene predicted gene, 25892
Gm9611 14 42293794 to 42297348 3554 - protein coding gene predicted gene 9611
Gm7995 14 42310217 to 42325396 15179 + protein coding gene predicted gene 7995
Gm17164 14 42359209 to 42361450 2241 - pseudogene predicted gene 17164
Gm2951 14 42371350 to 42373777 2427 - pseudogene predicted gene 2951
Gm2959 14 42411451 to 42414526 3075 + pseudogene predicted gene 2959
Gm8005 14 42434261 to 42439663 5402 - protein coding gene predicted gene 8005
Gm49360 14 42452905 to 42453082 177 + pseudogene predicted gene, 49360
Gm8011 14 42463881 to 42472122 8241 + protein coding gene predicted gene 8011
Gm2966 14 42485417 to 42487658 2241 - pseudogene predicted gene 2966
Gm8020 14 42499749 to 42502219 2470 - protein coding gene predicted gene 8020
Gm8024 14 42518878 to 42524282 5404 - protein coding gene predicted gene 8024
Gm48134 14 42543472 to 42543704 232 + pseudogene predicted gene, 48134
Gm8032 14 42557051 to 42560015 2964 + pseudogene predicted gene 8032
Gm46450 14 42566944 to 42572190 5246 - pseudogene predicted gene, 46450
Gm17204 14 42582988 to 42585202 2214 - pseudogene predicted gene 17204
Gm17124 14 42595184 to 42600141 4957 - protein coding gene predicted gene 17124
Gm25228 14 42614226 to 42614346 120 - miRNA gene predicted gene, 25228
Gm23620 14 42624917 to 42625037 120 - miRNA gene predicted gene, 23620
Gm3633 14 42636467 to 42641917 5450 - protein coding gene predicted gene 3633
Gm10378 14 42655938 to 42663605 7667 + protein coding gene predicted gene 10378
Gm17162 14 42685234 to 42687469 2235 - pseudogene predicted gene 17162
Gm5929 14 42697337 to 42699767 2430 - pseudogene predicted gene 5929
Gm3008 14 42728272 to 42731344 3072 + pseudogene predicted gene 3008
Gm17161 14 42752315 to 42754334 2019 - pseudogene predicted gene 17161
Gm3015 14 42766423 to 42768691 2268 - protein coding gene predicted gene 3015
Gm3025 14 42782883 to 42785217 2334 - pseudogene predicted gene 3025
Gm10377 14 42792568 to 42797935 5367 - protein coding gene predicted gene 10377
Gm7152 14 42825371 to 42828470 3099 + pseudogene predicted gene 7152
Gm21977 14 42847980 to 42853477 5497 - protein coding gene predicted gene 21977
Gm48217 14 42866650 to 42866857 207 + pseudogene predicted gene, 48217
Gm3102 14 42976995 to 42979191 2196 - pseudogene predicted gene 3102
Gm8082 14 42991226 to 42993494 2268 - protein coding gene predicted gene 8082
Gm3111 14 43000499 to 43002836 2337 - pseudogene predicted gene 3111
Gm10376 14 43013135 to 43015649 2514 - protein coding gene predicted gene 10376
Gm6536 14 43042970 to 43045946 2976 + pseudogene predicted gene 6536
Gm3123 14 43060214 to 43062467 2253 - pseudogene predicted gene 3123
Gm8094 14 43071142 to 43076643 5501 - protein coding gene predicted gene 8094
Gm49873 14 43089445 to 43109217 19772 + pseudogene predicted gene, 49873
Gm8104 14 43100601 to 43115190 14589 + protein coding gene predicted gene 8104
Cdv3-ps 14 43120937 to 43122471 1534 - pseudogene Cdv3 retrotransposed pseudogene
Tssr128215 14 43121155 to 43121158 3 - TSS region transcription start site region 128215
Gm49135 14 43131404 to 43146687 15283 + lincRNA gene predicted gene, 49135
Gm8114 14 43133466 to 43135689 2223 - pseudogene predicted gene 8114
Gm3141 14 43147487 to 43149893 2406 - pseudogene predicted gene 3141
Gm49141 14 43168628 to 43178007 9379 + pseudogene predicted gene, 49141
Gm7233 14 43179867 to 43187988 8121 + protein coding gene predicted gene 7233
Gm7316 14 43211909 to 43214147 2238 - pseudogene predicted gene 7316
Gm8122 14 43229832 to 43235304 5472 - protein coding gene predicted gene 8122
Gm49146 14 43250590 to 43258804 8214 + pseudogene predicted gene, 49146
Gm8126 14 43258649 to 43266799 8150 + protein coding gene predicted gene 8126
Gm9732 14 43274931 to 43305673 30742 + protein coding gene predicted gene 9732
Gm17153 14 43277419 to 43279645 2226 - pseudogene predicted gene 17153
Gm8127 14 43288288 to 43293803 5515 - protein coding gene predicted gene 8127
Gm17155 14 43318175 to 43320397 2222 - pseudogene predicted gene 17155
Gm17154 14 43332701 to 43334975 2274 - pseudogene predicted gene 17154
1700001F09Rik 14 43342384 to 43347811 5427 - protein coding gene RIKEN cDNA 1700001F09 gene
Gm9597 14 43386214 to 43394024 7810 + pseudogene predicted gene 9597
Gm49315 14 43399151 to 43400147 996 - pseudogene predicted gene, 49315