Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:41108288-45473803

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381 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mat1a 14 41105035 to 41124412 19377 + protein coding gene methionine adenosyltransferase I, alpha
Tssr125144 14 41109518 to 41109521 3 + TSS region transcription start site region 125144
Tssr125145 14 41111066 to 41111077 11 + TSS region transcription start site region 125145
Tssr125146 14 41114212 to 41114223 11 + TSS region transcription start site region 125146
Tssr125147 14 41114255 to 41114260 5 + TSS region transcription start site region 125147
Tssr125148 14 41114753 to 41114775 22 + TSS region transcription start site region 125148
Tssr125149 14 41114818 to 41114827 9 + TSS region transcription start site region 125149
Tssr125150 14 41114862 to 41114883 21 + TSS region transcription start site region 125150
Tssr125151 14 41114927 to 41114938 11 + TSS region transcription start site region 125151
Tssr125152 14 41115148 to 41115157 9 + TSS region transcription start site region 125152
Tssr125153 14 41115239 to 41115270 31 + TSS region transcription start site region 125153
Tssr125154 14 41115886 to 41115918 32 + TSS region transcription start site region 125154
Tssr125155 14 41116192 to 41116203 11 + TSS region transcription start site region 125155
Tssr125156 14 41116653 to 41116669 16 + TSS region transcription start site region 125156
Tssr125157 14 41116710 to 41116724 14 + TSS region transcription start site region 125157
Tssr125158 14 41117092 to 41117104 12 + TSS region transcription start site region 125158
Tssr125159 14 41121387 to 41121414 27 + TSS region transcription start site region 125159
Tssr125160 14 41121797 to 41121808 11 + TSS region transcription start site region 125160
Tssr125161 14 41122500 to 41122511 11 + TSS region transcription start site region 125161
Tssr128210 14 41122529 to 41122556 27 - TSS region transcription start site region 128210
Tssr125162 14 41122539 to 41122549 10 + TSS region transcription start site region 125162
Tssr125163 14 41122556 to 41122573 17 + TSS region transcription start site region 125163
Tssr125164 14 41122574 to 41122586 12 + TSS region transcription start site region 125164
Tssr125165 14 41122705 to 41122739 34 + TSS region transcription start site region 125165
Tssr125166 14 41122788 to 41122797 9 + TSS region transcription start site region 125166
Tssr125167 14 41122816 to 41122828 12 + TSS region transcription start site region 125167
Tssr125168 14 41122892 to 41122915 23 + TSS region transcription start site region 125168
Tssr125169 14 41123545 to 41123562 17 + TSS region transcription start site region 125169
Tssr125170 14 41131777 to 41131794 17 + TSS region transcription start site region 125170
Sftpa1 14 41131788 to 41136373 4585 + protein coding gene surfactant associated protein A1
Tssr125171 14 41132296 to 41132304 8 + TSS region transcription start site region 125171
Tssr125172 14 41134100 to 41134111 11 + TSS region transcription start site region 125172
Tssr125173 14 41134304 to 41134315 11 + TSS region transcription start site region 125173
Tssr128211 14 41134397 to 41134412 15 - TSS region transcription start site region 128211
Tssr125174 14 41134406 to 41134413 7 + TSS region transcription start site region 125174
Tssr125175 14 41134636 to 41134652 16 + TSS region transcription start site region 125175
Tssr125176 14 41136345 to 41136355 10 + TSS region transcription start site region 125176
Tssr125177 14 41136410 to 41136424 14 + TSS region transcription start site region 125177
Tssr125178 14 41136431 to 41136442 11 + TSS region transcription start site region 125178
Tssr125179 14 41136590 to 41136607 17 + TSS region transcription start site region 125179
Tssr125180 14 41136633 to 41136646 13 + TSS region transcription start site region 125180
Tssr125181 14 41136675 to 41136690 15 + TSS region transcription start site region 125181
Tssr125182 14 41137344 to 41137353 9 + TSS region transcription start site region 125182
Tssr125183 14 41137391 to 41137403 12 + TSS region transcription start site region 125183
Tssr125184 14 41137441 to 41137452 11 + TSS region transcription start site region 125184
Tssr125185 14 41137608 to 41137633 25 + TSS region transcription start site region 125185
Tssr125186 14 41137739 to 41137747 8 + TSS region transcription start site region 125186
Tssr125187 14 41137807 to 41137823 16 + TSS region transcription start site region 125187
Tssr125188 14 41137836 to 41137851 15 + TSS region transcription start site region 125188
Tssr125189 14 41137862 to 41137873 11 + TSS region transcription start site region 125189
Tssr125190 14 41137874 to 41137883 9 + TSS region transcription start site region 125190
Gm7920 14 41148912 to 41149104 192 + pseudogene predicted gene 7920
Tssr125191 14 41151442 to 41151512 70 + TSS region transcription start site region 125191
Mbl1 14 41151458 to 41159601 8143 + protein coding gene mannose-binding lectin (protein A) 1
Tssr125192 14 41151528 to 41151535 7 + TSS region transcription start site region 125192
Sftpd 14 41172214 to 41185149 12935 - protein coding gene surfactant associated protein D
Tssr125193 14 41172320 to 41172328 8 + TSS region transcription start site region 125193
Tssr128212 14 41185158 to 41185171 13 - TSS region transcription start site region 128212
Tssr128213 14 41185188 to 41185199 11 - TSS region transcription start site region 128213
Tssr128214 14 41185205 to 41185212 7 - TSS region transcription start site region 128214
Gm47114 14 41191401 to 41191653 252 - pseudogene predicted gene, 47114
Gm7925 14 41219463 to 41221651 2188 - pseudogene predicted gene 7925
Gm31895 14 41232267 to 41234850 2583 - lncRNA gene predicted gene, 31895
Gm22823 14 41247686 to 41247792 106 + snRNA gene predicted gene, 22823
Gm2832 14 41278805 to 41288815 10010 + protein coding gene predicted gene 2832
Gm9671 14 41307354 to 41309643 2289 - pseudogene predicted gene 9671
Gm5798 14 41348609 to 41356839 8230 + protein coding gene predicted gene 5798
Gm2855 14 41370175 to 41372374 2199 - pseudogene predicted gene 2855
Gm7945 14 41383751 to 41386229 2478 - protein coding gene predicted gene 7945
Gm6482 14 41402885 to 41408281 5396 - protein coding gene predicted gene 6482
Gm32762 14 41424608 to 41430456 5848 + lncRNA gene predicted gene, 32762
Gm7953 14 41436816 to 41439018 2202 - pseudogene predicted gene 7953
Gm7954 14 41451098 to 41453388 2290 - protein coding gene predicted gene 7954
Gm2878 14 41473616 to 41475917 2301 - pseudogene predicted gene 2878
Gm3486 14 41484232 to 41489485 5253 - protein coding gene predicted gene 3486
Gm6490 14 41518317 to 41520186 1869 + pseudogene predicted gene 6490
Gm17061 14 41538031 to 41540815 2784 - pseudogene predicted gene 17061
Gm7970 14 41550570 to 41555653 5083 - protein coding gene predicted gene 7970
1700049E17Rik2 14 41573211 to 41581305 8094 + protein coding gene tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2
Gm46479 14 41606468 to 41620385 13917 + lncRNA gene predicted gene, 46479
Gm17159 14 41608857 to 41611107 2250 - pseudogene predicted gene 17159
Gm3072 14 41622216 to 41624481 2265 - protein coding gene predicted gene 3072
Gm3077 14 41631680 to 41633816 2136 - pseudogene predicted gene 3077
Gm3676 14 41641179 to 41646487 5308 - protein coding gene predicted gene 3676
Gm8065 14 41673751 to 41676835 3084 + pseudogene predicted gene 8065
Gm8068 14 41696393 to 41701885 5492 - protein coding gene predicted gene 8068
Gm7929 14 41745917 to 41750614 4697 - protein coding gene predicted gene 7929
Gm47189 14 41767172 to 41772441 5269 - protein coding gene predicted gene, 47189
Gm17062 14 41889687 to 41892459 2772 - pseudogene predicted gene 17062
Gm7980 14 41902263 to 41907280 5017 - protein coding gene predicted gene 7980
1700049E17Rik1 14 41924949 to 41933041 8092 + protein coding gene RIKEN cDNA 1700049E17 gene, gene 1
1700024B05Rik 14 41943995 to 42003821 59826 + protein coding gene RIKEN cDNA 1700024B05 gene
Gm9890 14 41946433 to 41948671 2238 - pseudogene predicted gene 9890
Gm6401 14 41962708 to 41967927 5219 - protein coding gene predicted gene 6401
Gm3543 14 41977873 to 41983325 5452 - protein coding gene predicted gene 3543
1700016D02Rik 14 42023077 to 42036801 13724 unclassified gene RIKEN cDNA 1700016D02 gene
Gm17063 14 42025476 to 42027672 2196 - pseudogene predicted gene 17063
Gm2930 14 42037609 to 42040012 2403 - pseudogene predicted gene 2930
Gm7991 14 42067059 to 42070137 3078 + pseudogene predicted gene 7991
1700091H14Rik 14 42089750 to 42095277 5527 - lncRNA gene RIKEN cDNA 1700091H14 gene
Gm7951 14 42114803 to 42117238 2435 - protein coding gene predicted gene 7951
Gm41135 14 42124186 to 42129546 5360 - lncRNA gene predicted gene, 41135
Gm5376 14 42134452 to 42139693 5241 + unclassified gene predicted gene 5376
Gm17064 14 42145893 to 42148119 2226 - pseudogene predicted gene 17064
Gm17027 14 42160200 to 42162492 2292 - protein coding gene predicted gene 17027
Gm17166 14 42175704 to 42178006 2302 - pseudogene predicted gene 17166
Gm3573 14 42185391 to 42190791 5400 - protein coding gene predicted gene 3573
Gm17165 14 42218285 to 42220283 1998 + pseudogene predicted gene 17165
Gm46449 14 42227166 to 42232411 5245 - pseudogene predicted gene, 46449
Gm17038 14 42243217 to 42245444 2227 - pseudogene predicted gene 17038
Gm17026 14 42254659 to 42260048 5389 - protein coding gene predicted gene 17026
Gm25208 14 42274419 to 42274539 120 - miRNA gene predicted gene, 25208
Gm25892 14 42280342 to 42280462 120 - miRNA gene predicted gene, 25892
Gm9611 14 42293794 to 42297348 3554 - protein coding gene predicted gene 9611
Gm7995 14 42310217 to 42325396 15179 + protein coding gene predicted gene 7995
Gm17164 14 42359209 to 42361450 2241 - pseudogene predicted gene 17164
Gm2951 14 42371350 to 42373777 2427 - pseudogene predicted gene 2951
Gm2959 14 42411451 to 42414526 3075 + pseudogene predicted gene 2959
Gm8005 14 42434261 to 42439663 5402 - protein coding gene predicted gene 8005
Gm49360 14 42452905 to 42453082 177 + pseudogene predicted gene, 49360
Gm8011 14 42463881 to 42472122 8241 + protein coding gene predicted gene 8011
Gm2966 14 42485417 to 42487658 2241 - pseudogene predicted gene 2966
Gm8020 14 42499749 to 42502219 2470 - protein coding gene predicted gene 8020
Gm8024 14 42518878 to 42524282 5404 - protein coding gene predicted gene 8024
Gm48134 14 42543472 to 42543704 232 + pseudogene predicted gene, 48134
Gm8032 14 42557051 to 42560015 2964 + pseudogene predicted gene 8032
Gm46450 14 42566944 to 42572190 5246 - pseudogene predicted gene, 46450
Gm17204 14 42582988 to 42585202 2214 - pseudogene predicted gene 17204
Gm17124 14 42595184 to 42600141 4957 - protein coding gene predicted gene 17124
Gm25228 14 42614226 to 42614346 120 - miRNA gene predicted gene, 25228
Gm23620 14 42624917 to 42625037 120 - miRNA gene predicted gene, 23620
Gm3633 14 42636467 to 42641917 5450 - protein coding gene predicted gene 3633
Gm10378 14 42655938 to 42663605 7667 + protein coding gene predicted gene 10378
Gm17162 14 42685234 to 42687469 2235 - pseudogene predicted gene 17162
Gm5929 14 42697337 to 42699767 2430 - pseudogene predicted gene 5929
Gm3008 14 42728272 to 42731344 3072 + pseudogene predicted gene 3008
Gm17161 14 42752315 to 42754334 2019 - pseudogene predicted gene 17161
Gm3015 14 42766423 to 42768691 2268 - protein coding gene predicted gene 3015
Gm3025 14 42782883 to 42785217 2334 - pseudogene predicted gene 3025
Gm10377 14 42792568 to 42797935 5367 - protein coding gene predicted gene 10377
Gm7152 14 42825371 to 42828470 3099 + pseudogene predicted gene 7152
Gm21977 14 42847980 to 42853477 5497 - protein coding gene predicted gene 21977
Gm48217 14 42866650 to 42866857 207 + pseudogene predicted gene, 48217
Gm3102 14 42976995 to 42979191 2196 - pseudogene predicted gene 3102
Gm8082 14 42991226 to 42993494 2268 - protein coding gene predicted gene 8082
Gm3111 14 43000499 to 43002836 2337 - pseudogene predicted gene 3111
Gm10376 14 43013135 to 43015649 2514 - protein coding gene predicted gene 10376
Gm6536 14 43042970 to 43045946 2976 + pseudogene predicted gene 6536
Gm3123 14 43060214 to 43062467 2253 - pseudogene predicted gene 3123
Gm8094 14 43071142 to 43076643 5501 - protein coding gene predicted gene 8094
Gm49873 14 43089445 to 43109217 19772 + pseudogene predicted gene, 49873
Gm8104 14 43100601 to 43115190 14589 + protein coding gene predicted gene 8104
Cdv3-ps 14 43120937 to 43122471 1534 - pseudogene Cdv3 retrotransposed pseudogene
Tssr128215 14 43121155 to 43121158 3 - TSS region transcription start site region 128215
Gm49135 14 43131404 to 43146687 15283 + lincRNA gene predicted gene, 49135
Gm8114 14 43133466 to 43135689 2223 - pseudogene predicted gene 8114
Gm3141 14 43147487 to 43149893 2406 - pseudogene predicted gene 3141
Gm49141 14 43168628 to 43178007 9379 + pseudogene predicted gene, 49141
Gm7233 14 43179867 to 43187988 8121 + protein coding gene predicted gene 7233
Gm7316 14 43211909 to 43214147 2238 - pseudogene predicted gene 7316
Gm8122 14 43229832 to 43235304 5472 - protein coding gene predicted gene 8122
Gm49146 14 43250590 to 43258804 8214 + pseudogene predicted gene, 49146
Gm8126 14 43258649 to 43266799 8150 + protein coding gene predicted gene 8126
Gm9732 14 43274931 to 43305673 30742 + protein coding gene predicted gene 9732
Gm17153 14 43277419 to 43279645 2226 - pseudogene predicted gene 17153
Gm8127 14 43288288 to 43293803 5515 - protein coding gene predicted gene 8127
Gm17155 14 43318175 to 43320397 2222 - pseudogene predicted gene 17155
Gm17154 14 43332701 to 43334975 2274 - pseudogene predicted gene 17154
1700001F09Rik 14 43342384 to 43347811 5427 - protein coding gene RIKEN cDNA 1700001F09 gene
Gm9597 14 43386214 to 43394024 7810 + pseudogene predicted gene 9597
Gm49315 14 43399151 to 43400147 996 - pseudogene predicted gene, 49315
Gm8138 14 43410827 to 43416350 5523 - protein coding gene predicted gene 8138
Gm41136 14 43497580 to 43542453 44873 + lncRNA gene predicted gene, 41136
Gm49072 14 43500011 to 43501007 996 - pseudogene predicted gene, 49072
Gm21162 14 43513572 to 43517207 3635 - protein coding gene predicted gene, 21162
Gm5799 14 43543631 to 43550708 7077 + protein coding gene predicted gene 5799
Gm3216 14 43562300 to 43564547 2247 - pseudogene predicted gene 3216
Gm17654 14 43576734 to 43579012 2278 - protein coding gene predicted gene, 17654
Gm3221 14 43593005 to 43595276 2271 - pseudogene predicted gene 3221
Gm10375 14 43602627 to 43608013 5386 - protein coding gene predicted gene 10375
Gm8046 14 43635674 to 43638776 3102 + pseudogene predicted gene 8046
Gm21154 14 43646251 to 43673065 26814 + lincRNA gene predicted gene, 21154
Gm8161 14 43653029 to 43655027 1998 - pseudogene predicted gene 8161
Gm8165 14 43672650 to 43677460 4810 - protein coding gene predicted gene 8165
Gm9672 14 43700269 to 43702426 2157 - pseudogene predicted gene 9672
Gm17208 14 43713383 to 43715579 2196 + pseudogene predicted gene 17208
Tssr125194 14 43713729 to 43713737 8 + TSS region transcription start site region 125194
Gm7324 14 43713734 to 43715370 1636 + pseudogene predicted gene 7324
Gm16506 14 43725102 to 43727355 2253 - protein coding gene predicted gene 16506
Gm49078 14 43730063 to 43731362 1299 + pseudogene predicted gene, 49078
Cpgi6353 14 43736196 to 43736389 193 CpG island CpG island 6353
Gm49080 14 43736459 to 43736660 201 + pseudogene predicted gene, 49080
Gm6526 14 43747866 to 43755948 8082 + protein coding gene predicted gene 6526
Gm49965 14 43762152 to 43909143 146991 + lincRNA gene predicted gene, 49965
Gm41139 14 43766370 to 43777107 10737 + lncRNA gene predicted gene, 41139
Gm9587 14 43768934 to 43771115 2181 - pseudogene predicted gene 9587
Gm8180 14 43782319 to 43784616 2297 - protein coding gene predicted gene 8180
Gm49082 14 43787317 to 43788616 1299 + pseudogene predicted gene, 49082
D14Mit255a 14 43796151 to 43796269 118 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 255a
Cpgi6354 14 43796892 to 43797135 243 CpG island CpG island 6354