Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:39881149-41961271

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173 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr125128 14 39980523 to 39980526 3 + TSS region transcription start site region 125128
D14Mit212 14 40003816 to 40003917 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 212
Eif1-ps1 14 40006220 to 40006549 329 + pseudogene eukaryotic translation initiation factor 1, pseudogene 1
Gm25012 14 40009902 to 40010065 163 + snRNA gene predicted gene, 25012
Tssr125129 14 40081794 to 40081803 9 + TSS region transcription start site region 125129
Gm22191 14 40215132 to 40215241 109 - miRNA gene predicted gene, 22191
Gm4817 14 40294120 to 40295530 1410 - pseudogene predicted gene 4817
Tssr128172 14 40294739 to 40294742 3 - TSS region transcription start site region 128172
Tssr128173 14 40295558 to 40295572 14 - TSS region transcription start site region 128173
Gm22726 14 40318072 to 40318250 178 - unclassified non-coding RNA gene predicted gene, 22726
Gm48028 14 40329444 to 40329717 273 + pseudogene predicted gene, 48028
Gm24388 14 40421515 to 40421621 106 + snRNA gene predicted gene, 24388
Tssr125130 14 40448387 to 40448389 2 + TSS region transcription start site region 125130
Gm2791 14 40449115 to 40449618 503 + pseudogene predicted gene 2791
Tssr125131 14 40557168 to 40557170 2 + TSS region transcription start site region 125131
Gm5205 14 40557238 to 40558240 1002 + pseudogene predicted gene 5205
Gm48040 14 40747227 to 40748499 1272 + pseudogene predicted gene, 48040
Sh2d4b 14 40813789 to 40893266 79477 - protein coding gene SH2 domain containing 4B
D14Mit246 14 40880956 to 40881059 103 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-246
Tssr128174 14 40893222 to 40893237 15 - TSS region transcription start site region 128174
Tssr128175 14 40893308 to 40893319 11 - TSS region transcription start site region 128175
Cpgi6349 14 40894593 to 40894860 267 CpG island CpG island 6349
D130076A03Rik 14 40895250 to 40900897 5647 unclassified gene RIKEN cDNA D130076A03 gene
Tssr128176 14 40899255 to 40899263 8 - TSS region transcription start site region 128176
Tssr128177 14 40899274 to 40899301 27 - TSS region transcription start site region 128177
Tssr128178 14 40899308 to 40899334 26 - TSS region transcription start site region 128178
Tssr128179 14 40899367 to 40899378 11 - TSS region transcription start site region 128179
Tssr128180 14 40899389 to 40899398 9 - TSS region transcription start site region 128180
Tspan14 14 40906445 to 40966807 60362 - protein coding gene tetraspanin 14
Tssr128181 14 40907469 to 40907484 15 - TSS region transcription start site region 128181
D14Mit256 14 40921149 to 40921271 122 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 256
D14Mit56 14 40925831 to 40925995 164 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 56
Tssr128182 14 40937474 to 40937476 2 - TSS region transcription start site region 128182
Tssr128183 14 40949745 to 40949753 8 - TSS region transcription start site region 128183
Tssr128184 14 40965602 to 40965605 3 - TSS region transcription start site region 128184
Cpgi6350 14 40965856 to 40967799 1943 CpG island CpG island 6350
Tssr128185 14 40966814 to 40966848 34 - TSS region transcription start site region 128185
Tssr128186 14 40966852 to 40966869 17 - TSS region transcription start site region 128186
Tssr128187 14 40966881 to 40966896 15 - TSS region transcription start site region 128187
Tssr128188 14 40966946 to 40966966 20 - TSS region transcription start site region 128188
Tssr125132 14 40972628 to 40972664 36 + TSS region transcription start site region 125132
Tssr125133 14 40972685 to 40972688 3 + TSS region transcription start site region 125133
Gm31839 14 40974343 to 40981350 7007 + lncRNA gene predicted gene, 31839
Prxl2a 14 40993740 to 41013788 20048 - protein coding gene peroxiredoxin like 2A
Tssr128189 14 40994065 to 40994081 16 - TSS region transcription start site region 128189
Tssr128190 14 40994213 to 40994225 12 - TSS region transcription start site region 128190
Tssr128191 14 40994317 to 40994340 23 - TSS region transcription start site region 128191
Tssr128192 14 40994421 to 40994450 29 - TSS region transcription start site region 128192
Tssr128193 14 41004226 to 41004260 34 - TSS region transcription start site region 128193
Tssr128194 14 41004267 to 41004283 16 - TSS region transcription start site region 128194
Tssr128195 14 41004373 to 41004384 11 - TSS region transcription start site region 128195
Tssr128196 14 41004394 to 41004412 18 - TSS region transcription start site region 128196
Tssr128197 14 41004455 to 41004467 12 - TSS region transcription start site region 128197
Tssr128198 14 41004517 to 41004528 11 - TSS region transcription start site region 128198
Tssr128199 14 41006882 to 41006912 30 - TSS region transcription start site region 128199
Tssr128200 14 41008223 to 41008252 29 - TSS region transcription start site region 128200
Tssr128201 14 41008256 to 41008275 19 - TSS region transcription start site region 128201
Tssr128202 14 41008279 to 41008286 7 - TSS region transcription start site region 128202
Tssr128203 14 41008287 to 41008298 11 - TSS region transcription start site region 128203
Tssr128204 14 41008363 to 41008364 1 - TSS region transcription start site region 128204
Cpgi6351 14 41013470 to 41014000 530 CpG island CpG island 6351
Tssr128205 14 41013753 to 41013817 64 - TSS region transcription start site region 128205
Tssr128206 14 41030967 to 41030970 3 - TSS region transcription start site region 128206
Tssr128207 14 41030983 to 41030996 13 - TSS region transcription start site region 128207
Tssr128208 14 41031015 to 41031019 4 - TSS region transcription start site region 128208
Dydc2 14 41049117 to 41069208 20091 - protein coding gene DPY30 domain containing 2
Gm47547 14 41053653 to 41061614 7961 + antisense lncRNA gene predicted gene, 47547
Tssr128209 14 41069193 to 41069212 19 - TSS region transcription start site region 128209
Cpgi6352 14 41072673 to 41073049 376 CpG island CpG island 6352
Tssr125134 14 41072860 to 41072903 43 + TSS region transcription start site region 125134
Tssr125135 14 41072905 to 41072922 17 + TSS region transcription start site region 125135
Dydc1 14 41072911 to 41092197 19286 + protein coding gene DPY30 domain containing 1
Tssr125136 14 41072936 to 41072943 7 + TSS region transcription start site region 125136
Tssr125137 14 41096951 to 41096956 5 + TSS region transcription start site region 125137
Tssr125138 14 41104318 to 41104334 16 + TSS region transcription start site region 125138
Tssr125139 14 41105012 to 41105021 9 + TSS region transcription start site region 125139
Mat1a 14 41105035 to 41124412 19377 + protein coding gene methionine adenosyltransferase I, alpha
Tssr125140 14 41105204 to 41105219 15 + TSS region transcription start site region 125140
Tssr125141 14 41105359 to 41105378 19 + TSS region transcription start site region 125141
Tssr125142 14 41105544 to 41105569 25 + TSS region transcription start site region 125142
Tssr125143 14 41106848 to 41106858 10 + TSS region transcription start site region 125143
Tssr125144 14 41109518 to 41109521 3 + TSS region transcription start site region 125144
Tssr125145 14 41111066 to 41111077 11 + TSS region transcription start site region 125145
Tssr125146 14 41114212 to 41114223 11 + TSS region transcription start site region 125146
Tssr125147 14 41114255 to 41114260 5 + TSS region transcription start site region 125147
Tssr125148 14 41114753 to 41114775 22 + TSS region transcription start site region 125148
Tssr125149 14 41114818 to 41114827 9 + TSS region transcription start site region 125149
Tssr125150 14 41114862 to 41114883 21 + TSS region transcription start site region 125150
Tssr125151 14 41114927 to 41114938 11 + TSS region transcription start site region 125151
Tssr125152 14 41115148 to 41115157 9 + TSS region transcription start site region 125152
Tssr125153 14 41115239 to 41115270 31 + TSS region transcription start site region 125153
Tssr125154 14 41115886 to 41115918 32 + TSS region transcription start site region 125154
Tssr125155 14 41116192 to 41116203 11 + TSS region transcription start site region 125155
Tssr125156 14 41116653 to 41116669 16 + TSS region transcription start site region 125156
Tssr125157 14 41116710 to 41116724 14 + TSS region transcription start site region 125157
Tssr125158 14 41117092 to 41117104 12 + TSS region transcription start site region 125158
Tssr125159 14 41121387 to 41121414 27 + TSS region transcription start site region 125159
Tssr125160 14 41121797 to 41121808 11 + TSS region transcription start site region 125160
Tssr125161 14 41122500 to 41122511 11 + TSS region transcription start site region 125161
Tssr128210 14 41122529 to 41122556 27 - TSS region transcription start site region 128210
Tssr125162 14 41122539 to 41122549 10 + TSS region transcription start site region 125162
Tssr125163 14 41122556 to 41122573 17 + TSS region transcription start site region 125163
Tssr125164 14 41122574 to 41122586 12 + TSS region transcription start site region 125164
Tssr125165 14 41122705 to 41122739 34 + TSS region transcription start site region 125165
Tssr125166 14 41122788 to 41122797 9 + TSS region transcription start site region 125166
Tssr125167 14 41122816 to 41122828 12 + TSS region transcription start site region 125167
Tssr125168 14 41122892 to 41122915 23 + TSS region transcription start site region 125168
Tssr125169 14 41123545 to 41123562 17 + TSS region transcription start site region 125169
Tssr125170 14 41131777 to 41131794 17 + TSS region transcription start site region 125170
Sftpa1 14 41131788 to 41136373 4585 + protein coding gene surfactant associated protein A1
Tssr125171 14 41132296 to 41132304 8 + TSS region transcription start site region 125171
Tssr125172 14 41134100 to 41134111 11 + TSS region transcription start site region 125172
Tssr125173 14 41134304 to 41134315 11 + TSS region transcription start site region 125173
Tssr128211 14 41134397 to 41134412 15 - TSS region transcription start site region 128211
Tssr125174 14 41134406 to 41134413 7 + TSS region transcription start site region 125174
Tssr125175 14 41134636 to 41134652 16 + TSS region transcription start site region 125175
Tssr125176 14 41136345 to 41136355 10 + TSS region transcription start site region 125176
Tssr125177 14 41136410 to 41136424 14 + TSS region transcription start site region 125177
Tssr125178 14 41136431 to 41136442 11 + TSS region transcription start site region 125178
Tssr125179 14 41136590 to 41136607 17 + TSS region transcription start site region 125179
Tssr125180 14 41136633 to 41136646 13 + TSS region transcription start site region 125180
Tssr125181 14 41136675 to 41136690 15 + TSS region transcription start site region 125181
Tssr125182 14 41137344 to 41137353 9 + TSS region transcription start site region 125182
Tssr125183 14 41137391 to 41137403 12 + TSS region transcription start site region 125183
Tssr125184 14 41137441 to 41137452 11 + TSS region transcription start site region 125184
Tssr125185 14 41137608 to 41137633 25 + TSS region transcription start site region 125185
Tssr125186 14 41137739 to 41137747 8 + TSS region transcription start site region 125186
Tssr125187 14 41137807 to 41137823 16 + TSS region transcription start site region 125187
Tssr125188 14 41137836 to 41137851 15 + TSS region transcription start site region 125188
Tssr125189 14 41137862 to 41137873 11 + TSS region transcription start site region 125189
Tssr125190 14 41137874 to 41137883 9 + TSS region transcription start site region 125190
Gm7920 14 41148912 to 41149104 192 + pseudogene predicted gene 7920
Tssr125191 14 41151442 to 41151512 70 + TSS region transcription start site region 125191
Mbl1 14 41151458 to 41159601 8143 + protein coding gene mannose-binding lectin (protein A) 1
Tssr125192 14 41151528 to 41151535 7 + TSS region transcription start site region 125192
Sftpd 14 41172214 to 41185149 12935 - protein coding gene surfactant associated protein D
Tssr125193 14 41172320 to 41172328 8 + TSS region transcription start site region 125193
Tssr128212 14 41185158 to 41185171 13 - TSS region transcription start site region 128212
Tssr128213 14 41185188 to 41185199 11 - TSS region transcription start site region 128213
Tssr128214 14 41185205 to 41185212 7 - TSS region transcription start site region 128214
Gm47114 14 41191401 to 41191653 252 - pseudogene predicted gene, 47114
Gm7925 14 41219463 to 41221651 2188 - pseudogene predicted gene 7925
Gm31895 14 41232267 to 41234850 2583 - lncRNA gene predicted gene, 31895
Gm22823 14 41247686 to 41247792 106 + snRNA gene predicted gene, 22823
Gm2832 14 41278805 to 41288815 10010 + protein coding gene predicted gene 2832
Gm9671 14 41307354 to 41309643 2289 - pseudogene predicted gene 9671
Gm5798 14 41348609 to 41356839 8230 + protein coding gene predicted gene 5798
Gm2855 14 41370175 to 41372374 2199 - pseudogene predicted gene 2855
Gm7945 14 41383751 to 41386229 2478 - protein coding gene predicted gene 7945
Gm6482 14 41402885 to 41408281 5396 - protein coding gene predicted gene 6482
Gm32762 14 41424608 to 41430456 5848 + lncRNA gene predicted gene, 32762
Gm7953 14 41436816 to 41439018 2202 - pseudogene predicted gene 7953
Gm7954 14 41451098 to 41453388 2290 - protein coding gene predicted gene 7954
Gm2878 14 41473616 to 41475917 2301 - pseudogene predicted gene 2878
Gm3486 14 41484232 to 41489485 5253 - protein coding gene predicted gene 3486
Gm6490 14 41518317 to 41520186 1869 + pseudogene predicted gene 6490
Gm17061 14 41538031 to 41540815 2784 - pseudogene predicted gene 17061
Gm7970 14 41550570 to 41555653 5083 - protein coding gene predicted gene 7970
1700049E17Rik2 14 41573211 to 41581305 8094 + protein coding gene tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2
Gm46479 14 41606468 to 41620385 13917 + lncRNA gene predicted gene, 46479
Gm17159 14 41608857 to 41611107 2250 - pseudogene predicted gene 17159
Gm3072 14 41622216 to 41624481 2265 - protein coding gene predicted gene 3072
Gm3077 14 41631680 to 41633816 2136 - pseudogene predicted gene 3077
Gm3676 14 41641179 to 41646487 5308 - protein coding gene predicted gene 3676
Gm8065 14 41673751 to 41676835 3084 + pseudogene predicted gene 8065
Gm8068 14 41696393 to 41701885 5492 - protein coding gene predicted gene 8068
Gm7929 14 41745917 to 41750614 4697 - protein coding gene predicted gene 7929
Gm47189 14 41767172 to 41772441 5269 - protein coding gene predicted gene, 47189
Gm17062 14 41889687 to 41892459 2772 - pseudogene predicted gene 17062
Gm7980 14 41902263 to 41907280 5017 - protein coding gene predicted gene 7980
1700049E17Rik1 14 41924949 to 41933041 8092 + protein coding gene RIKEN cDNA 1700049E17 gene, gene 1
1700024B05Rik 14 41943995 to 42003821 59826 + protein coding gene RIKEN cDNA 1700024B05 gene
Gm9890 14 41946433 to 41948671 2238 - pseudogene predicted gene 9890