Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:39499739-41089742

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr125126 14 39655361 to 39655373 12 + TSS region transcription start site region 125126
Tssr125127 14 39655648 to 39655675 27 + TSS region transcription start site region 125127
1700109I08Rik 14 39655663 to 39685293 29630 + lincRNA gene RIKEN cDNA 1700109I08 gene
Gm35389 14 39839784 to 39840009 225 - pseudogene predicted gene, 35389
Tssr125128 14 39980523 to 39980526 3 + TSS region transcription start site region 125128
D14Mit212 14 40003816 to 40003917 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 212
Eif1-ps1 14 40006220 to 40006549 329 + pseudogene eukaryotic translation initiation factor 1, pseudogene 1
Gm25012 14 40009902 to 40010065 163 + snRNA gene predicted gene, 25012
Tssr125129 14 40081794 to 40081803 9 + TSS region transcription start site region 125129
Gm22191 14 40215132 to 40215241 109 - miRNA gene predicted gene, 22191
Gm4817 14 40294120 to 40295530 1410 - pseudogene predicted gene 4817
Tssr128172 14 40294739 to 40294742 3 - TSS region transcription start site region 128172
Tssr128173 14 40295558 to 40295572 14 - TSS region transcription start site region 128173
Gm22726 14 40318072 to 40318250 178 - unclassified non-coding RNA gene predicted gene, 22726
Gm48028 14 40329444 to 40329717 273 + pseudogene predicted gene, 48028
Gm24388 14 40421515 to 40421621 106 + snRNA gene predicted gene, 24388
Tssr125130 14 40448387 to 40448389 2 + TSS region transcription start site region 125130
Gm2791 14 40449115 to 40449618 503 + pseudogene predicted gene 2791
Tssr125131 14 40557168 to 40557170 2 + TSS region transcription start site region 125131
Gm5205 14 40557238 to 40558240 1002 + pseudogene predicted gene 5205
Gm48040 14 40747227 to 40748499 1272 + pseudogene predicted gene, 48040
Sh2d4b 14 40813789 to 40893266 79477 - protein coding gene SH2 domain containing 4B
D14Mit246 14 40880956 to 40881059 103 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-246
Tssr128174 14 40893222 to 40893237 15 - TSS region transcription start site region 128174
Tssr128175 14 40893308 to 40893319 11 - TSS region transcription start site region 128175
Cpgi6349 14 40894593 to 40894860 267 CpG island CpG island 6349
D130076A03Rik 14 40895250 to 40900897 5647 unclassified gene RIKEN cDNA D130076A03 gene
Tssr128176 14 40899255 to 40899263 8 - TSS region transcription start site region 128176
Tssr128177 14 40899274 to 40899301 27 - TSS region transcription start site region 128177
Tssr128178 14 40899308 to 40899334 26 - TSS region transcription start site region 128178
Tssr128179 14 40899367 to 40899378 11 - TSS region transcription start site region 128179
Tssr128180 14 40899389 to 40899398 9 - TSS region transcription start site region 128180
Tspan14 14 40906445 to 40966807 60362 - protein coding gene tetraspanin 14
Tssr128181 14 40907469 to 40907484 15 - TSS region transcription start site region 128181
D14Mit256 14 40921149 to 40921271 122 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 256
D14Mit56 14 40925831 to 40925995 164 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 56
Tssr128182 14 40937474 to 40937476 2 - TSS region transcription start site region 128182
Tssr128183 14 40949745 to 40949753 8 - TSS region transcription start site region 128183
Tssr128184 14 40965602 to 40965605 3 - TSS region transcription start site region 128184
Cpgi6350 14 40965856 to 40967799 1943 CpG island CpG island 6350
Tssr128185 14 40966814 to 40966848 34 - TSS region transcription start site region 128185
Tssr128186 14 40966852 to 40966869 17 - TSS region transcription start site region 128186
Tssr128187 14 40966881 to 40966896 15 - TSS region transcription start site region 128187
Tssr128188 14 40966946 to 40966966 20 - TSS region transcription start site region 128188
Tssr125132 14 40972628 to 40972664 36 + TSS region transcription start site region 125132
Tssr125133 14 40972685 to 40972688 3 + TSS region transcription start site region 125133
Gm31839 14 40974343 to 40981350 7007 + lncRNA gene predicted gene, 31839
Prxl2a 14 40993740 to 41013788 20048 - protein coding gene peroxiredoxin like 2A
Tssr128189 14 40994065 to 40994081 16 - TSS region transcription start site region 128189
Tssr128190 14 40994213 to 40994225 12 - TSS region transcription start site region 128190
Tssr128191 14 40994317 to 40994340 23 - TSS region transcription start site region 128191
Tssr128192 14 40994421 to 40994450 29 - TSS region transcription start site region 128192
Tssr128193 14 41004226 to 41004260 34 - TSS region transcription start site region 128193
Tssr128194 14 41004267 to 41004283 16 - TSS region transcription start site region 128194
Tssr128195 14 41004373 to 41004384 11 - TSS region transcription start site region 128195
Tssr128196 14 41004394 to 41004412 18 - TSS region transcription start site region 128196
Tssr128197 14 41004455 to 41004467 12 - TSS region transcription start site region 128197
Tssr128198 14 41004517 to 41004528 11 - TSS region transcription start site region 128198
Tssr128199 14 41006882 to 41006912 30 - TSS region transcription start site region 128199
Tssr128200 14 41008223 to 41008252 29 - TSS region transcription start site region 128200
Tssr128201 14 41008256 to 41008275 19 - TSS region transcription start site region 128201
Tssr128202 14 41008279 to 41008286 7 - TSS region transcription start site region 128202
Tssr128203 14 41008287 to 41008298 11 - TSS region transcription start site region 128203
Tssr128204 14 41008363 to 41008364 1 - TSS region transcription start site region 128204
Cpgi6351 14 41013470 to 41014000 530 CpG island CpG island 6351
Tssr128205 14 41013753 to 41013817 64 - TSS region transcription start site region 128205
Tssr128206 14 41030967 to 41030970 3 - TSS region transcription start site region 128206
Tssr128207 14 41030983 to 41030996 13 - TSS region transcription start site region 128207
Tssr128208 14 41031015 to 41031019 4 - TSS region transcription start site region 128208
Dydc2 14 41049117 to 41069208 20091 - protein coding gene DPY30 domain containing 2
Gm47547 14 41053653 to 41061614 7961 + antisense lncRNA gene predicted gene, 47547
Tssr128209 14 41069193 to 41069212 19 - TSS region transcription start site region 128209
Cpgi6352 14 41072673 to 41073049 376 CpG island CpG island 6352
Tssr125134 14 41072860 to 41072903 43 + TSS region transcription start site region 125134
Tssr125135 14 41072905 to 41072922 17 + TSS region transcription start site region 125135
Dydc1 14 41072911 to 41092197 19286 + protein coding gene DPY30 domain containing 1
Tssr125136 14 41072936 to 41072943 7 + TSS region transcription start site region 125136