Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:10711076-12271657

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fhitos 14 10738553 to 10779001 40448 + antisense lncRNA gene fragile histidine triad gene, opposite strand
Gm48437 14 10779067 to 10780448 1381 - unclassified gene predicted gene, 48437
Tssr124256 14 11122754 to 11122756 2 + TSS region transcription start site region 124256
Cpgi6161 14 11161649 to 11162201 552 CpG island CpG island 6161
Tssr127449 14 11162008 to 11162041 33 - TSS region transcription start site region 127449
Fhit 14 11162035 to 9550092 -1611943 - protein coding gene fragile histidine triad gene
Slc25a5-ps 14 11179630 to 11180888 1258 + pseudogene Slc25a5 retrotransposed pseudogene
D14Mit245 14 11217344 to 11217450 106 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-245
Tssr124257 14 11227511 to 11227514 3 + TSS region transcription start site region 124257
Rpl21-ps4 14 11227552 to 11227989 437 + pseudogene ribosomal protein L21, pseudogene 4
Cpgi6162 14 11236020 to 11236220 200 CpG island CpG island 6162
Gm3839 14 11280751 to 11281951 1200 - protein coding gene predicted pseudogene 3839
Mir5124b 14 11282477 to 11282561 84 + miRNA gene microRNA 5124b
Tssr4249 14 11317527 to 11317534 7 + TSS region transcription start site region 4249
Tssr127450 14 11335043 to 11335051 8 - TSS region transcription start site region 127450
Gm25466 14 11335873 to 11336004 131 + snoRNA gene predicted gene, 25466
D14Mit1 14 11369444 to 11369550 106 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1
Gm48592 14 11392560 to 11392925 365 + pseudogene predicted gene, 48592
Gm48594 14 11460359 to 11502992 42633 + lincRNA gene predicted gene, 48594
Gm8438 14 11491076 to 11491657 581 - pseudogene predicted gene 8438
Gm48595 14 11510535 to 11520770 10235 - lincRNA gene predicted gene, 48595
Cpgi6163 14 11552671 to 11555315 2644 CpG island CpG island 6163
Tssr124258 14 11553461 to 11553484 23 + TSS region transcription start site region 124258
Tssr124259 14 11553499 to 11553514 15 + TSS region transcription start site region 124259
Tssr124260 14 11553523 to 11553542 19 + TSS region transcription start site region 124260
Ptprg 14 11553553 to 12242040 688487 + protein coding gene protein tyrosine phosphatase, receptor type, G
Bomd2 14 11553553 to 12242040 688487 QTL bone mineral density 2
Tssr124261 14 11553555 to 11553564 9 + TSS region transcription start site region 124261
Tssr124262 14 11553568 to 11553597 29 + TSS region transcription start site region 124262
Tssr124263 14 11553598 to 11553615 17 + TSS region transcription start site region 124263
Tssr124264 14 11553702 to 11553773 71 + TSS region transcription start site region 124264
Cpgi6164 14 11555654 to 11555906 252 CpG island CpG island 6164
Cpgi6165 14 11556281 to 11556747 466 CpG island CpG island 6165
Tssr124265 14 11570018 to 11570031 13 + TSS region transcription start site region 124265
Tssr124266 14 11570039 to 11570051 12 + TSS region transcription start site region 124266
Tssr124267 14 11570100 to 11570115 15 + TSS region transcription start site region 124267
Tssr124268 14 11604056 to 11604060 4 + TSS region transcription start site region 124268
Tssr124269 14 11617662 to 11617691 29 + TSS region transcription start site region 124269
Tssr124270 14 11618625 to 11618629 4 + TSS region transcription start site region 124270
Tssr124271 14 11640120 to 11640121 1 + TSS region transcription start site region 124271
Tssr124272 14 11697053 to 11697057 4 + TSS region transcription start site region 124272
Gm48602 14 11767943 to 11771311 3368 + unclassified gene predicted gene, 48602
Tssr124273 14 11814525 to 11814528 3 + TSS region transcription start site region 124273
Tssr124274 14 11824362 to 11824367 5 + TSS region transcription start site region 124274
Gm48601 14 11867594 to 11870625 3031 + unclassified gene predicted gene, 48601
Gm48600 14 11904679 to 11909158 4479 + unclassified gene predicted gene, 48600
Gm3848 14 11965446 to 11981223 15777 - antisense lncRNA gene predicted gene 3848
Tssr127451 14 11981225 to 11981232 7 - TSS region transcription start site region 127451
Tssr124275 14 11986236 to 11986240 4 + TSS region transcription start site region 124275
Tssr124276 14 12046045 to 12046049 4 + TSS region transcription start site region 124276
Sluc40 14 12089820 to 12089969 149 QTL susceptibility to lung cancer 40
D14Mit11 14 12089820 to 12089969 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 11
Gm48603 14 12151447 to 12152584 1137 - unclassified gene predicted gene, 48603
Tssr124277 14 12189948 to 12189953 5 + TSS region transcription start site region 124277
Tssr124278 14 12189969 to 12190001 32 + TSS region transcription start site region 124278
Tssr124279 14 12190003 to 12190025 22 + TSS region transcription start site region 124279
Tssr124280 14 12190042 to 12190047 5 + TSS region transcription start site region 124280
D14Mit108 14 12242322 to 12242454 132 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 108