Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:89582026-89742034

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hapln1 13 89540528 to 89611832 71304 + protein coding gene hyaluronan and proteoglycan link protein 1
Tssr120588 13 89584524 to 89584543 19 + TSS region transcription start site region 120588
Tssr120589 13 89584651 to 89584708 57 + TSS region transcription start site region 120589
Vcan 13 89655312 to 89742509 87197 - protein coding gene versican
Tssr123378 13 89658104 to 89658126 22 - TSS region transcription start site region 123378
Tssr123379 13 89662026 to 89662034 8 - TSS region transcription start site region 123379
Tssr123380 13 89662056 to 89662067 11 - TSS region transcription start site region 123380
Gm16318 13 89662770 to 89663370 600 + pseudogene predicted gene 16318
Tssr123381 13 89690731 to 89690735 4 - TSS region transcription start site region 123381
Tssr123382 13 89694925 to 89694931 6 - TSS region transcription start site region 123382
Tssr123383 13 89712274 to 89712288 14 - TSS region transcription start site region 123383
Gm4117 13 89734040 to 89798058 64018 + antisense lncRNA gene predicted gene 4117
Cpgi5922 13 89739332 to 89739788 456 CpG island CpG island 5922
Tssr120590 13 89739451 to 89739471 20 + TSS region transcription start site region 120590
Tssr120591 13 89739479 to 89739493 14 + TSS region transcription start site region 120591
Cpgi5923 13 89740676 to 89741356 680 CpG island CpG island 5923
Acigg6 13 105683731 to 89583537 -16100194 QTL anti COL7 IgG2a/c antibody 6