Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:16020875-17110977

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
B230303A05Rik 13 15813548 to 16023423 209875 - pseudogene RIKEN cDNA B230303A05 gene
Inhba 13 16011851 to 16031621 19770 + protein coding gene inhibin beta-A
Tssr118446 13 16021673 to 16021693 20 + TSS region transcription start site region 118446
Tssr121516 13 16023401 to 16023437 36 - TSS region transcription start site region 121516
Gm48444 13 16025382 to 16032275 6893 - antisense lncRNA gene predicted gene, 48444
Tssr118447 13 16026419 to 16026424 5 + TSS region transcription start site region 118447
Tssr118448 13 16026447 to 16026458 11 + TSS region transcription start site region 118448
Tssr118449 13 16026532 to 16026543 11 + TSS region transcription start site region 118449
Tssr121517 13 16026627 to 16026673 46 - TSS region transcription start site region 121517
Tssr118450 13 16026776 to 16026783 7 + TSS region transcription start site region 118450
Tssr118451 13 16026838 to 16026849 11 + TSS region transcription start site region 118451
Tssr118452 13 16026900 to 16026911 11 + TSS region transcription start site region 118452
Tssr118453 13 16026934 to 16026945 11 + TSS region transcription start site region 118453
Tssr118454 13 16026979 to 16027002 23 + TSS region transcription start site region 118454
Tssr118455 13 16027030 to 16027045 15 + TSS region transcription start site region 118455
Tssr118456 13 16027064 to 16027076 12 + TSS region transcription start site region 118456
Tssr118457 13 16027083 to 16027095 12 + TSS region transcription start site region 118457
Tssr118458 13 16027104 to 16027131 27 + TSS region transcription start site region 118458
Tssr118459 13 16027142 to 16027163 21 + TSS region transcription start site region 118459
Tssr121518 13 16027178 to 16027194 16 - TSS region transcription start site region 121518
Tssr118460 13 16027197 to 16027222 25 + TSS region transcription start site region 118460
Tssr121519 13 16027322 to 16027341 19 - TSS region transcription start site region 121519
Tssr118461 13 16027326 to 16027369 43 + TSS region transcription start site region 118461
Tssr118462 13 16027399 to 16027414 15 + TSS region transcription start site region 118462
Tssr118463 13 16027417 to 16027443 26 + TSS region transcription start site region 118463
Tssr118464 13 16027471 to 16027485 14 + TSS region transcription start site region 118464
Tssr118465 13 16027498 to 16027509 11 + TSS region transcription start site region 118465
Tssr118466 13 16027546 to 16027561 15 + TSS region transcription start site region 118466
Tssr118467 13 16027581 to 16027592 11 + TSS region transcription start site region 118467
Tssr118468 13 16027594 to 16027610 16 + TSS region transcription start site region 118468
Tssr118469 13 16027620 to 16027642 22 + TSS region transcription start site region 118469
Tssr118470 13 16027833 to 16027852 19 + TSS region transcription start site region 118470
Tssr118471 13 16027984 to 16027995 11 + TSS region transcription start site region 118471
Tssr118472 13 16028013 to 16028032 19 + TSS region transcription start site region 118472
Tssr118473 13 16028299 to 16028308 9 + TSS region transcription start site region 118473
Tssr118474 13 16028551 to 16028567 16 + TSS region transcription start site region 118474
Tssr118475 13 16028837 to 16028856 19 + TSS region transcription start site region 118475
Tssr118476 13 16029027 to 16029040 13 + TSS region transcription start site region 118476
Tssr118477 13 16029187 to 16029200 13 + TSS region transcription start site region 118477
Tssr118478 13 16029955 to 16029974 19 + TSS region transcription start site region 118478
Tssr118479 13 16030578 to 16030597 19 + TSS region transcription start site region 118479
Tssr118480 13 16030808 to 16030825 17 + TSS region transcription start site region 118480
Tssr118481 13 16030957 to 16030973 16 + TSS region transcription start site region 118481
Tssr118482 13 16031048 to 16031059 11 + TSS region transcription start site region 118482
Tssr118483 13 16031086 to 16031105 19 + TSS region transcription start site region 118483
AI256733 13 16032247 to 16032453 206 DNA segment EST AI256733
Gm22628 13 16041046 to 16041152 106 - snRNA gene predicted gene, 22628
Gm6562 13 16045641 to 16046104 463 + pseudogene predicted gene 6562
Gm31711 13 16213569 to 16213764 195 - lncRNA gene predicted gene, 31711
Tssr121520 13 16261325 to 16261348 23 - TSS region transcription start site region 121520
Gm48491 13 16273191 to 16277838 4647 - lincRNA gene predicted gene, 48491
Gm48492 13 16368944 to 16373180 4236 - lincRNA gene predicted gene, 48492
Gm48493 13 16385919 to 16389759 3840 - pseudogene predicted gene, 48493
Gm48494 13 16390591 to 16390854 263 + pseudogene predicted gene, 48494
Gm48496 13 16431525 to 16431780 255 - pseudogene predicted gene, 48496
D13Mit207 13 16434362 to 16434497 135 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 207
Gm48497 13 16533539 to 16533821 282 - pseudogene predicted gene, 48497
D13Mit162 13 16565875 to 16565977 102 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 162
Gm7537 13 16638077 to 16639490 1413 - pseudogene predicted gene 7537
Tssr118484 13 16756178 to 16756182 4 + TSS region transcription start site region 118484
D13Mit305 13 16779372 to 16779487 115 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 305
Sugct 13 16857472 to 17694795 837323 - protein coding gene succinyl-CoA glutarate-CoA transferase
Gm26098 13 16859185 to 16859472 287 - unclassified non-coding RNA gene predicted gene, 26098
Tssr4001 13 16910931 to 16910932 1 + TSS region transcription start site region 4001
Gm48503 13 16937609 to 16947045 9436 + antisense lncRNA gene predicted gene, 48503
Gm48499 13 16943846 to 16945569 1723 + pseudogene predicted gene, 48499
Igmsc1 13 16993960 to 44765084 27771124 QTL immunoglobulin M secreting cells 1
Cd4ts6 13 16993960 to 16994099 139 QTL CD4 T cell subset 6
D13Mit57 13 16993960 to 16994099 139 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 57
D13Mit174 13 17014923 to 17015046 123 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 174
Pbd2 13 17014923 to 38763430 21748507 QTL peak bone density 2
Eosn2 13 17046726 to 17046726 0 QTL eosinophil differential 2
Gm27043 13 17050921 to 17051878 957 + pseudogene predicted gene, 27043