Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:84072536-84192557

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acot5 12 84069325 to 84076020 6695 + protein coding gene acyl-CoA thioesterase 5
Tssr3888 12 84085052 to 84085055 3 + TSS region transcription start site region 3888
Gm8385 12 84087015 to 84087640 625 - pseudogene predicted gene 8385
Acot6 12 84100654 to 84109783 9129 + protein coding gene acyl-CoA thioesterase 6
Cpgi4858 12 84100709 to 84101696 987 CpG island CpG island 4858
Tssr114317 12 84100740 to 84100791 51 + TSS region transcription start site region 114317
Tssr114318 12 84100797 to 84100815 18 + TSS region transcription start site region 114318
Cpgi4859 12 84114256 to 84114602 346 CpG island CpG island 4859
Dnal1 12 84114279 to 84143517 29238 + protein coding gene dynein, axonemal, light chain 1
Tssr114319 12 84114299 to 84114310 11 + TSS region transcription start site region 114319
Tssr114320 12 84114321 to 84114383 62 + TSS region transcription start site region 114320
Tssr114321 12 84126241 to 84126246 5 + TSS region transcription start site region 114321
Tssr114322 12 84132536 to 84132557 21 + TSS region transcription start site region 114322
Pnma1 12 84146131 to 84148489 2358 - protein coding gene paraneoplastic antigen MA1
Cpgi4860 12 84147979 to 84148704 725 CpG island CpG island 4860
Tssr116979 12 84148213 to 84148227 14 - TSS region transcription start site region 116979
Tssr116980 12 84148449 to 84148499 50 - TSS region transcription start site region 116980
D12Mit254 12 84148890 to 84149000 110 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 254
Elmsan1 12 84149176 to 84218881 69705 - protein coding gene ELM2 and Myb/SANT-like domain containing 1
Tssr114323 12 84151219 to 84151235 16 + TSS region transcription start site region 114323
Gm46368 12 84152989 to 84156491 3502 + lncRNA gene predicted gene, 46368
Cpgi4861 12 84154830 to 84155011 181 CpG island CpG island 4861
Gm40476 12 84158351 to 84160759 2408 + lncRNA gene predicted gene, 40476
Gm40475 12 84163028 to 84169109 6081 + lncRNA gene predicted gene, 40475
D12Dcr8 12 84170445 to 84170540 95 DNA segment DNA Segment, Chr 12, Derry C. Roopenian 8
Tssr116981 12 84172403 to 84172407 4 - TSS region transcription start site region 116981
Tssr116982 12 84173451 to 84173476 25 - TSS region transcription start site region 116982
Tssr116983 12 84174934 to 84174943 9 - TSS region transcription start site region 116983
Cpgi4862 12 84175576 to 84176006 430 CpG island CpG island 4862
Tssr116984 12 84175639 to 84175659 20 - TSS region transcription start site region 116984
Tssr116985 12 84177371 to 84177402 31 - TSS region transcription start site region 116985
Tssr3889 12 84177420 to 84177445 25 - TSS region transcription start site region 3889
Gm19327 12 84184536 to 84187806 3270 - unclassified gene predicted gene, 19327
D12Mit160 12 84188540 to 84188671 131 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 160