Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:83678634-83877382

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbm25 12 83632230 to 83683127 50897 + protein coding gene RNA binding motif protein 25
Tssr114286 12 83682547 to 83682560 13 + TSS region transcription start site region 114286
Tssr114287 12 83682918 to 83682929 11 + TSS region transcription start site region 114287
Tssr114288 12 83682973 to 83682997 24 + TSS region transcription start site region 114288
Cpgi4846 12 83687842 to 83688904 1062 CpG island CpG island 4846
Tssr114289 12 83688123 to 83688249 126 + TSS region transcription start site region 114289
Psen1 12 83688152 to 83735199 47047 + protein coding gene presenilin 1
Tssr114290 12 83688251 to 83688268 17 + TSS region transcription start site region 114290
Gm47666 12 83730062 to 83731457 1395 - antisense lncRNA gene predicted gene, 47666
Tssr116969 12 83731447 to 83731473 26 - TSS region transcription start site region 116969
Tssr114291 12 83731570 to 83731591 21 + TSS region transcription start site region 114291
Gm18592 12 83742762 to 83743037 275 + pseudogene predicted gene, 18592
Gm47681 12 83758944 to 83759346 402 + pseudogene predicted gene, 47681
Tssr114292 12 83763628 to 83763648 20 + TSS region transcription start site region 114292
Papln 12 83763634 to 83792382 28748 + protein coding gene papilin, proteoglycan-like sulfated glycoprotein
Cpgi4847 12 83763634 to 83764209 575 CpG island CpG island 4847
Tssr114293 12 83763656 to 83763671 15 + TSS region transcription start site region 114293
Cpgi4848 12 83771741 to 83772265 524 CpG island CpG island 4848
Cpgi4849 12 83781879 to 83782058 179 CpG island CpG island 4849
Numb 12 83794034 to 83921934 127900 - protein coding gene NUMB endocytic adaptor protein
Gm46367 12 83819656 to 83831936 12280 + lncRNA gene predicted gene, 46367
Tssr116970 12 83819943 to 83819946 3 - TSS region transcription start site region 116970
Tssr116971 12 83827618 to 83827645 27 - TSS region transcription start site region 116971
Gm47748 12 83848050 to 83848391 341 + pseudogene predicted gene, 47748
Tssr116972 12 83864307 to 83864309 2 - TSS region transcription start site region 116972
Gm3791 12 83875115 to 83875882 767 - pseudogene predicted gene 3791