Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:83480926-83660929

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dpf3 12 83213745 to 83487716 273971 - protein coding gene D4, zinc and double PHD fingers, family 3
Cpgi4840 12 83485598 to 83487977 2379 CpG island CpG island 4840
Tssr116952 12 83487713 to 83487729 16 - TSS region transcription start site region 116952
Tssr116953 12 83487731 to 83487740 9 - TSS region transcription start site region 116953
Cpgi4841 12 83488313 to 83488557 244 CpG island CpG island 4841
Gm47184 12 83505082 to 83505579 497 + pseudogene predicted gene, 47184
Cpgi4842 12 83520249 to 83520869 620 CpG island CpG island 4842
Tssr116954 12 83520289 to 83520332 43 - TSS region transcription start site region 116954
Tssr114255 12 83520436 to 83520447 11 + TSS region transcription start site region 114255
Dcaf4 12 83520466 to 83541920 21454 + protein coding gene DDB1 and CUL4 associated factor 4
Tssr114256 12 83520467 to 83520484 17 + TSS region transcription start site region 114256
Tssr114257 12 83520504 to 83520517 13 + TSS region transcription start site region 114257
Tssr114258 12 83520528 to 83520598 70 + TSS region transcription start site region 114258
Tssr114259 12 83526043 to 83526069 26 + TSS region transcription start site region 114259
Zfyve1 12 83546558 to 83597222 50664 - protein coding gene zinc finger, FYVE domain containing 1
Tssr116955 12 83562427 to 83562440 13 - TSS region transcription start site region 116955
Tssr116956 12 83562443 to 83562462 19 - TSS region transcription start site region 116956
Tssr116957 12 83562465 to 83562466 1 - TSS region transcription start site region 116957
Tssr116958 12 83570926 to 83570929 3 - TSS region transcription start site region 116958
Tssr116959 12 83590907 to 83590912 5 - TSS region transcription start site region 116959
Cpgi4843 12 83596777 to 83597466 689 CpG island CpG island 4843
Tssr116960 12 83597111 to 83597121 10 - TSS region transcription start site region 116960
Tssr116961 12 83597140 to 83597177 37 - TSS region transcription start site region 116961
Tssr116962 12 83597190 to 83597245 55 - TSS region transcription start site region 116962
Tssr116963 12 83606453 to 83606492 39 - TSS region transcription start site region 116963
Gm26623 12 83620210 to 83621174 964 + lincRNA gene predicted gene, 26623
Gm6722 12 83620680 to 83621069 389 - pseudogene predicted gene 6722
Cpgi4844 12 83620865 to 83621189 324 CpG island CpG island 4844
Tssr116964 12 83621173 to 83621179 6 - TSS region transcription start site region 116964
Gm29361 12 83631834 to 83633833 1999 - antisense lncRNA gene predicted gene 29361
Cpgi4845 12 83631960 to 83632887 927 CpG island CpG island 4845
Tssr116965 12 83632003 to 83632041 38 - TSS region transcription start site region 116965
Tssr114260 12 83632194 to 83632203 9 + TSS region transcription start site region 114260
Tssr114261 12 83632208 to 83632325 117 + TSS region transcription start site region 114261
Rbm25 12 83632230 to 83683127 50897 + protein coding gene RNA binding motif protein 25
Tssr116966 12 83632505 to 83632531 26 - TSS region transcription start site region 116966
Tssr114262 12 83632573 to 83632600 27 + TSS region transcription start site region 114262
Tssr114263 12 83641500 to 83641505 5 + TSS region transcription start site region 114263
Tssr114264 12 83642633 to 83642675 42 + TSS region transcription start site region 114264
Tssr114265 12 83644387 to 83644425 38 + TSS region transcription start site region 114265
Tssr114266 12 83646153 to 83646193 40 + TSS region transcription start site region 114266
Tssr114267 12 83651290 to 83651322 32 + TSS region transcription start site region 114267
Tssr114268 12 83653429 to 83653433 4 + TSS region transcription start site region 114268
Tssr114269 12 83659418 to 83659425 7 + TSS region transcription start site region 114269
Tssr114270 12 83659428 to 83659439 11 + TSS region transcription start site region 114270
Tssr114271 12 83659500 to 83659515 15 + TSS region transcription start site region 114271
Tssr114272 12 83659516 to 83659527 11 + TSS region transcription start site region 114272
Tssr114273 12 83659554 to 83659568 14 + TSS region transcription start site region 114273
Tssr114274 12 83660302 to 83660333 31 + TSS region transcription start site region 114274
Tssr114275 12 83660590 to 83660645 55 + TSS region transcription start site region 114275