Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:81127915-81403180

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smoc1 12 81026808 to 81186414 159606 + protein coding gene SPARC related modular calcium binding 1
Tssr114193 12 81152421 to 81152432 11 + TSS region transcription start site region 114193
Tssr114194 12 81152479 to 81152497 18 + TSS region transcription start site region 114194
Mir3067 12 81166151 to 81166234 83 + miRNA gene microRNA 3067
Tssr114195 12 81183879 to 81183889 10 + TSS region transcription start site region 114195
Slc8a3 12 81197915 to 81333180 135265 - protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 3
Gm3693 12 81227580 to 81242492 14912 + antisense lncRNA gene predicted gene 3693
2310068G24Rik 12 81243457 to 81245070 1613 unclassified gene RIKEN cDNA 2310068G24 gene
Tssr116916 12 81287110 to 81287111 1 - TSS region transcription start site region 116916
Cpgi4827 12 81331985 to 81333611 1626 CpG island CpG island 4827
Tssr116917 12 81333129 to 81333220 91 - TSS region transcription start site region 116917
Tssr116918 12 81333523 to 81333552 29 - TSS region transcription start site region 116918
Gm46365 12 81333835 to 81341365 7530 + lncRNA gene predicted gene, 46365
Gm20498 12 81358860 to 81532905 174045 - protein coding gene predicted gene 20498
Cox16 12 81359026 to 81485127 126101 - protein coding gene cytochrome c oxidase assembly protein 16
Gm3695 12 81372213 to 81373221 1008 - pseudogene predicted gene 3695
Tssr116919 12 81373292 to 81373293 1 - TSS region transcription start site region 116919
Gm4787 12 81376991 to 81379464 2473 - protein coding gene predicted gene 4787
Hspe1-ps2 12 81399812 to 81400123 311 + pseudogene heat shock protein 1 (chaperonin 10), pseudogene 2