MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 12:54459233-54659246

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr116297	12	54459472 to 54459478	6	-	TSS region	transcription start site region 116297
Gm36213	12	54463133 to 54479471	16338	-	lncRNA gene	predicted gene, 36213
Gm10465	12	54512421 to 54517079	4658	-	lincRNA gene	predicted gene 10465
Gm40425	12	54549885 to 54553804	3919	+	lncRNA gene	predicted gene, 40425
Tssr3845	12	54559233 to 54559246	13	+	TSS region	transcription start site region 3845
Tssr113475	12	54622530 to 54622575	45	+	TSS region	transcription start site region 113475
Gm6218	12	54622590 to 54623217	627	+	pseudogene	predicted gene 6218
D12Mit88	12	54638868 to 54639009	141		DNA segment	DNA segment, Chr 12, Massachusetts Institute of Technology 88
Sptssa	12	54645392 to 54656573	11181	-	protein coding gene	serine palmitoyltransferase, small subunit A
Mir1892	12	54645933 to 54646012	79	-	miRNA gene	microRNA 1892
D12Mit285	12	54649125 to 54649249	124		DNA segment	DNA Segment, Chr 12, Massachusetts Institute of Technology 285
Ahrq1	12	54649125 to 82619165	27970040		QTL	airway hyperresponsiveness QTL 1
Tssr116298	12	54649871 to 54649877	6	-	TSS region	transcription start site region 116298
Cpgi4609	12	54656079 to 54656945	866		CpG island	CpG island 4609
Tssr116299	12	54656496 to 54656517	21	-	TSS region	transcription start site region 116299
Tssr113476	12	54656752 to 54656774	22	+	TSS region	transcription start site region 113476
Tssr113477	12	54656808 to 54656813	5	+	TSS region	transcription start site region 113477
Gm40884	12	54658820 to 54659907	1087	+	lincRNA gene	predicted gene, 40884