Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:31490354-31739658

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cbll1 12 31484829 to 31499616 14787 - protein coding gene Casitas B-lineage lymphoma-like 1
Cpgi4533 12 31498939 to 31500341 1402 CpG island CpG island 4533
Tssr116042 12 31499541 to 31499563 22 - TSS region transcription start site region 116042
Gm40362 12 31499759 to 31512966 13207 + lncRNA gene predicted gene, 40362
Tssr116043 12 31499879 to 31499892 13 - TSS region transcription start site region 116043
Gm10473 12 31500067 to 31500746 679 unclassified gene predicted gene 10473
Gm29541 12 31500068 to 31500745 677 - lincRNA gene predicted gene 29541
Slc26a4 12 31519827 to 31559969 40142 - protein coding gene solute carrier family 26, member 4
Tssr3818 12 31536556 to 31536566 10 - TSS region transcription start site region 3818
D12Mit59 12 31542527 to 31542677 150 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 59
Cpgi4534 12 31558923 to 31560005 1082 CpG island CpG island 4534
Tssr116044 12 31559983 to 31559984 1 - TSS region transcription start site region 116044
Gm48524 12 31562866 to 31563225 359 + pseudogene predicted gene, 48524
Bcap29 12 31595354 to 31634658 39304 - protein coding gene B cell receptor associated protein 29
Tssr116045 12 31617166 to 31617180 14 - TSS region transcription start site region 116045
Cpgi4535 12 31631335 to 31631595 260 CpG island CpG island 4535
Cpgi4536 12 31634208 to 31635019 811 CpG island CpG island 4536
Tssr116046 12 31634417 to 31634497 80 - TSS region transcription start site region 116046
Tssr116047 12 31634502 to 31634514 12 - TSS region transcription start site region 116047
Tssr116048 12 31634525 to 31634543 18 - TSS region transcription start site region 116048
Tssr116049 12 31634569 to 31634581 12 - TSS region transcription start site region 116049
Tssr116050 12 31634592 to 31634677 85 - TSS region transcription start site region 116050
Dus4l 12 31640050 to 31654826 14776 - protein coding gene dihydrouridine synthase 4-like (S. cerevisiae)
Cpgi4537 12 31654509 to 31655452 943 CpG island CpG island 4537
Tssr116051 12 31654767 to 31654840 73 - TSS region transcription start site region 116051
Tssr113120 12 31654848 to 31654891 43 + TSS region transcription start site region 113120
Cog5 12 31654869 to 31937630 282761 + protein coding gene component of oligomeric golgi complex 5
Tssr113121 12 31671000 to 31671005 5 + TSS region transcription start site region 113121
D12Mit270 12 31705716 to 31705862 146 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 270
Gpr22 12 31706867 to 31713926 7059 - protein coding gene G protein-coupled receptor 22
Tssr116052 12 31713741 to 31713748 7 - TSS region transcription start site region 116052
Tssr116053 12 31713818 to 31713825 7 - TSS region transcription start site region 116053
Tssr116054 12 31713837 to 31713848 11 - TSS region transcription start site region 116054
Tssr116055 12 31713860 to 31713871 11 - TSS region transcription start site region 116055
Tssr116056 12 31713873 to 31713898 25 - TSS region transcription start site region 116056
Tssr113122 12 31735691 to 31735714 23 + TSS region transcription start site region 113122