Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:27338201-27875362

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sox11 12 27334264 to 27342574 8310 - protein coding gene SRY (sex determining region Y)-box 11
Tssr115978 12 27338243 to 27338250 7 - TSS region transcription start site region 115978
Tssr115979 12 27338335 to 27338340 5 - TSS region transcription start site region 115979
Tssr115980 12 27338502 to 27338518 16 - TSS region transcription start site region 115980
Cpgi4506 12 27338747 to 27339713 966 CpG island CpG island 4506
Tssr115981 12 27339183 to 27339220 37 - TSS region transcription start site region 115981
Tssr113044 12 27339363 to 27339369 6 + TSS region transcription start site region 113044
Tssr115982 12 27339406 to 27339414 8 - TSS region transcription start site region 115982
Tssr115983 12 27340184 to 27340197 13 - TSS region transcription start site region 115983
Tssr115984 12 27340199 to 27340204 5 - TSS region transcription start site region 115984
Tssr115985 12 27340257 to 27340268 11 - TSS region transcription start site region 115985
Tssr115986 12 27340273 to 27340284 11 - TSS region transcription start site region 115986
Tssr115987 12 27340294 to 27340310 16 - TSS region transcription start site region 115987
Tssr115988 12 27340321 to 27340332 11 - TSS region transcription start site region 115988
Tssr115989 12 27340369 to 27340374 5 - TSS region transcription start site region 115989
Tssr115990 12 27340440 to 27340457 17 - TSS region transcription start site region 115990
Tssr115991 12 27340527 to 27340542 15 - TSS region transcription start site region 115991
Tssr115992 12 27340618 to 27340642 24 - TSS region transcription start site region 115992
Tssr115993 12 27340719 to 27340728 9 - TSS region transcription start site region 115993
Tssr115994 12 27340736 to 27340746 10 - TSS region transcription start site region 115994
Tssr115995 12 27340753 to 27340764 11 - TSS region transcription start site region 115995
Cpgi4507 12 27341101 to 27343659 2558 CpG island CpG island 4507
Tssr115996 12 27341120 to 27341132 12 - TSS region transcription start site region 115996
Tssr115997 12 27341146 to 27341161 15 - TSS region transcription start site region 115997
Tssr115998 12 27341604 to 27341615 11 - TSS region transcription start site region 115998
Tssr115999 12 27341648 to 27341659 11 - TSS region transcription start site region 115999
Tssr116000 12 27341684 to 27341697 13 - TSS region transcription start site region 116000
Tssr116001 12 27342391 to 27342417 26 - TSS region transcription start site region 116001
Tssr116002 12 27342445 to 27342457 12 - TSS region transcription start site region 116002
Tssr116003 12 27342696 to 27342726 30 - TSS region transcription start site region 116003
Tssr113045 12 27342906 to 27342927 21 + TSS region transcription start site region 113045
Gm30855 12 27345139 to 27359073 13934 + lncRNA gene predicted gene, 30855
Bglu15 12 27570643 to 27570810 167 QTL blood glucose level 15
D12Mit84 12 27570643 to 27570810 167 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 84
Gm4166 12 27598201 to 27615362 17161 + lincRNA gene predicted gene 4166
Gm24326 12 27631803 to 27631927 124 + snoRNA gene predicted gene, 24326
D12Mit284 12 27765921 to 27766042 121 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 284