Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:117533023-117783045

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rapgef5 12 117516479 to 117759737 243258 + protein coding gene Rap guanine nucleotide exchange factor (GEF) 5
Cpgi5227 12 117533555 to 117534755 1200 CpG island CpG island 5227
Tssr115537 12 117533857 to 117533910 53 + TSS region transcription start site region 115537
Tssr115538 12 117533920 to 117533942 22 + TSS region transcription start site region 115538
Tssr115539 12 117533946 to 117533956 10 + TSS region transcription start site region 115539
Gm24741 12 117574342 to 117574447 105 + rRNA gene predicted gene, 24741
A930023M06Rik 12 117602039 to 117603763 1724 + sense intronic lncRNA gene RIKEN cDNA A930023M06 gene
Tssr115540 12 117625078 to 117625085 7 + TSS region transcription start site region 115540
Tssr115541 12 117626357 to 117626385 28 + TSS region transcription start site region 115541
D830016K09Rik 12 117630013 to 117633779 3766 unclassified gene RIKEN cDNA D830016K09 gene
Tssr115542 12 117658023 to 117658045 22 + TSS region transcription start site region 115542
Tssr115543 12 117658050 to 117658064 14 + TSS region transcription start site region 115543
Tssr115544 12 117658076 to 117658087 11 + TSS region transcription start site region 115544
Cpgi5228 12 117688578 to 117689180 602 CpG island CpG island 5228
Tssr115545 12 117688717 to 117688727 10 + TSS region transcription start site region 115545
Tssr115546 12 117688746 to 117688764 18 + TSS region transcription start site region 115546
Tssr115547 12 117688792 to 117688876 84 + TSS region transcription start site region 115547
Gm18955 12 117723974 to 117724568 594 + pseudogene predicted gene, 18955
Tssr115548 12 117742761 to 117742771 10 + TSS region transcription start site region 115548
Tssr115549 12 117763511 to 117763526 15 + TSS region transcription start site region 115549