Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:116062988-116263809

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp386 12 116047707 to 116063231 15524 + protein coding gene zinc finger protein 386 (Kruppel-like)
Gm46383 12 116075152 to 116078237 3085 - lncRNA gene predicted gene, 46383
Cpgi5214 12 116077543 to 116078255 712 CpG island CpG island 5214
Tssr115513 12 116077720 to 116077839 119 + TSS region transcription start site region 115513
Vipr2 12 116077726 to 116146261 68535 + protein coding gene vasoactive intestinal peptide receptor 2
Gm20658 12 116100553 to 116112310 11757 - antisense lncRNA gene predicted gene 20658
Tssr115514 12 116140942 to 116140955 13 + TSS region transcription start site region 115514
Tssr115515 12 116140968 to 116140979 11 + TSS region transcription start site region 115515
Tssr115516 12 116140983 to 116140993 10 + TSS region transcription start site region 115516
Gm48618 12 116151603 to 116152341 738 - pseudogene predicted gene, 48618
Gm44372 12 116152101 to 116152221 120 - miRNA gene predicted gene, 44372
Gm48620 12 116162988 to 116163809 821 - pseudogene predicted gene, 48620
Gm23732 12 116173313 to 116173419 106 + snRNA gene predicted gene, 23732
Gm46330 12 116196083 to 116197444 1361 + lncRNA gene predicted gene, 46330
Tssr118132 12 116200205 to 116200227 22 - TSS region transcription start site region 118132
Wdr60 12 116206262 to 116263022 56760 - protein coding gene WD repeat domain 60
Gm23190 12 116242504 to 116242567 63 - miRNA gene predicted gene, 23190
Tssr118133 12 116256032 to 116256046 14 - TSS region transcription start site region 118133
Cpgi5215 12 116262661 to 116263197 536 CpG island CpG island 5215
Tssr118134 12 116262946 to 116263046 100 - TSS region transcription start site region 118134