Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:113696408-114096946

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ighv5-12 12 113702126 to 113702419 293 - gene segment immunoglobulin heavy variable 5-12
Tssr118046 12 113702651 to 113702662 11 - TSS region transcription start site region 118046
Ighv2-6 12 113716672 to 113716962 290 - gene segment immunoglobulin heavy variable 2-6
Gm37976 12 113718318 to 113719231 913 - pseudogenic gene segment predicted gene, 37976
Gm37418 12 113724761 to 113725196 435 - pseudogenic gene segment predicted gene, 37418
Ighv5-9-1 12 113736113 to 113736406 293 - gene segment immunoglobulin heavy variable 5-9-1
Tssr118047 12 113736641 to 113736659 18 - TSS region transcription start site region 118047
Gm38203 12 113745520 to 113745889 369 - pseudogenic gene segment predicted gene, 38203
Ighv5-12-4 12 113762251 to 113762544 293 - gene segment immunoglobulin heavy variable 5-12-4
Gm38205 12 113767840 to 113768220 380 - pseudogenic gene segment predicted gene, 38205
Ighv2-9-1 12 113769857 to 113770142 285 - gene segment immunoglobulin heavy variable 2-9-1
Gm37722 12 113772004 to 113772334 330 - pseudogenic gene segment predicted gene, 37722
Ighv5-13 12 113794063 to 113794358 295 - pseudogenic gene segment immunoglobulin heavy variable V5-13
Ighv2-6-8 12 113796138 to 113796430 292 - gene segment immunoglobulin heavy variable 2-6-8
Gm7003 12 113803004 to 113803206 202 - pseudogenic gene segment predicted gene 7003
Ighv2-7 12 113807314 to 113807747 433 - gene segment immunoglobulin heavy variable 2-7
Tssr118048 12 113807773 to 113807779 6 - TSS region transcription start site region 118048
Rpl26-ps3 12 113825226 to 113825660 434 + pseudogene ribosomal protein L26, pseudogene 3
Ighv5-15 12 113826648 to 113826941 293 - gene segment immunoglobulin heavy variable 5-15
Tssr118049 12 113827187 to 113827204 17 - TSS region transcription start site region 118049
Ighv5-16 12 113838528 to 113838821 293 - gene segment immunoglobulin heavy variable 5-16
Tssr118050 12 113839029 to 113839045 16 - TSS region transcription start site region 118050
Ighv5-17 12 113859149 to 113859442 293 - gene segment immunoglobulin heavy variable 5-17
Tssr118051 12 113859682 to 113859700 18 - TSS region transcription start site region 118051
Ighv5-18 12 113875796 to 113876239 443 - pseudogenic gene segment immunoglobulin heavy variable V5-18
Ighv2-8 12 113877361 to 113877659 298 - pseudogenic gene segment immunoglobulin heavy variable V2-8
Ighv2-9 12 113879097 to 113879388 291 - gene segment immunoglobulin heavy variable 2-9
Tssr118052 12 113879554 to 113879558 4 - TSS region transcription start site region 118052
Ighv5-19 12 113884761 to 113885057 296 - pseudogenic gene segment immunoglobulin heavy variable V5-19
Ighv7-1 12 113896408 to 113896946 538 - pseudogenic gene segment immunoglobulin heavy variable 7-1
Im6 12 113896717 to 113896905 188 QTL immunoregulatory 6
Sluc12 12 113896717 to 113896905 188 QTL susceptibility to lung cancer 12
D12Nds2 12 113896717 to 113896905 188 DNA segment DNA segment, Chr 12, Nuffield Department of Surgery 2
Tssr115506 12 113896919 to 113896922 3 + TSS region transcription start site region 115506
Tssr118053 12 113897004 to 113897010 6 - TSS region transcription start site region 118053
Ighv7-2 12 113912025 to 113912483 458 - gene segment immunoglobulin heavy variable 7-2
Ighv14-1 12 113931953 to 113932246 293 - gene segment immunoglobulin heavy variable 14-1
Tssr118054 12 113932424 to 113932432 8 - TSS region transcription start site region 118054
Ighv4-1 12 113948284 to 113948577 293 - gene segment immunoglobulin heavy variable 4-1
Ighv3-1 12 113964390 to 113964683 293 - gene segment immunoglobulin heavy variable 3-1
Tssr118055 12 113964865 to 113964874 9 - TSS region transcription start site region 118055
Gm37961 12 113968554 to 113968852 298 - pseudogenic gene segment predicted gene, 37961
Ighv11-1 12 113981879 to 113982174 295 - gene segment immunoglobulin heavy variable 11-1
Ighv14-2 12 113994469 to 113994898 429 - gene segment immunoglobulin heavy variable 14-2
Tssr118056 12 113994940 to 113994949 9 - TSS region transcription start site region 118056
Ighv4-2 12 114013144 to 114013439 295 - pseudogenic gene segment immunoglobulin heavy variable V4-2
Ighv3-2 12 114033803 to 114034097 294 - pseudogenic gene segment immunoglobulin heavy variable 3-2
Ighv11-2 12 114048241 to 114048704 463 - gene segment immunoglobulin heavy variable V11-2
Tssr118057 12 114048736 to 114048746 10 - TSS region transcription start site region 118057
Tssr118058 12 114048748 to 114048769 21 - TSS region transcription start site region 118058
Tssr3974 12 114048779 to 114048780 1 - TSS region transcription start site region 3974
Ighv14-3 12 114059845 to 114060273 428 - gene segment immunoglobulin heavy variable V14-3
Tssr118059 12 114060315 to 114060322 7 - TSS region transcription start site region 118059
Ighv16-1 12 114068828 to 114069126 298 - gene segment immunoglobulin heavy variable 16-1
Ighv6-2 12 114089387 to 114089681 294 - pseudogenic gene segment immunoglobulin heavy variable V6-2
Ighv9-1 12 114093928 to 114094221 293 - gene segment immunoglobulin heavy variable 9-1