Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:113428504-113728990

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ighj4 12 113428514 to 113428567 53 - gene segment immunoglobulin heavy joining 4
Tssr118005 12 113428534 to 113428547 13 - TSS region transcription start site region 118005
Tssr118006 12 113428555 to 113428578 23 - TSS region transcription start site region 118006
Tssr118007 12 113428608 to 113428624 16 - TSS region transcription start site region 118007
Tssr118008 12 113428639 to 113428651 12 - TSS region transcription start site region 118008
Tssr118009 12 113428652 to 113428662 10 - TSS region transcription start site region 118009
Tssr118010 12 113428789 to 113428800 11 - TSS region transcription start site region 118010
Tssr118011 12 113428888 to 113428898 10 - TSS region transcription start site region 118011
Ighj3 12 113429085 to 113429132 47 - gene segment immunoglobulin heavy joining 3
Tssr118012 12 113429108 to 113429133 25 - TSS region transcription start site region 118012
Tssr118013 12 113429136 to 113429148 12 - TSS region transcription start site region 118013
Tssr118014 12 113429242 to 113429252 10 - TSS region transcription start site region 118014
Tssr118015 12 113429308 to 113429348 40 - TSS region transcription start site region 118015
Ighj2 12 113429468 to 113429515 47 - gene segment immunoglobulin heavy joining 2
Tssr118016 12 113429490 to 113429502 12 - TSS region transcription start site region 118016
Ighj1 12 113429781 to 113429833 52 - gene segment immunoglobulin heavy joining 1
Tssr118017 12 113429820 to 113429842 22 - TSS region transcription start site region 118017
Tssr115504 12 113430227 to 113430240 13 + TSS region transcription start site region 115504
Tssr118018 12 113430376 to 113430385 9 - TSS region transcription start site region 118018
Tssr118019 12 113430393 to 113430441 48 - TSS region transcription start site region 118019
Tssr118020 12 113430449 to 113430486 37 - TSS region transcription start site region 118020
Ighd4-1 12 113430528 to 113430538 10 - gene segment immunoglobulin heavy diversity 4-1
Tssr118021 12 113430589 to 113430603 14 - TSS region transcription start site region 118021
Tssr118022 12 113430621 to 113430632 11 - TSS region transcription start site region 118022
Tssr118023 12 113430786 to 113430795 9 - TSS region transcription start site region 118023
Tssr115505 12 113446406 to 113446410 4 + TSS region transcription start site region 115505
Ighd3-2 12 113448214 to 113448229 15 - gene segment immunoglobulin heavy diversity 3-2
Ighd5-6 12 113449588 to 113449597 9 - pseudogenic gene segment immunoglobulin heavy diversity 5-6
Ighd2-8 12 113450851 to 113450867 16 - gene segment immunoglobulin heavy diversity 2-8
Ighd5-5 12 113454942 to 113454951 9 - pseudogenic gene segment immunoglobulin heavy diversity 5-5
Ighd2-7 12 113456720 to 113456736 16 - gene segment immunoglobulin heavy diversity 2-7
Ighd5-8 12 113459864 to 113459892 28 - pseudogenic gene segment immunoglobulin heavy diversity 5-8
Ighd5-4 12 113460101 to 113460110 9 - pseudogenic gene segment immunoglobulin heavy diversity 5-4
Ighd2-6 12 113461369 to 113461385 16 - gene segment immunoglobulin heavy diversity 2-6
Ighd5-7 12 113464524 to 113464552 28 - pseudogenic gene segment immunoglobulin heavy diversity 5-7
Ighd5-3 12 113464761 to 113464770 9 - pseudogenic gene segment immunoglobulin heavy diversity 5-3
Ighd2-5 12 113466027 to 113466043 16 - gene segment immunoglobulin heavy diversity 2-5
Gm37327 12 113469189 to 113469217 28 - gene segment predicted gene, 37327
Ighd5-2 12 113469426 to 113469435 9 - pseudogenic gene segment immunoglobulin heavy diversity 5-2
Ighd2-4 12 113470694 to 113470710 16 - gene segment immunoglobulin heavy diversity 2-4
Ighd6-2 12 113474875 to 113474903 28 - pseudogenic gene segment immunoglobulin heavy diversity 6-2
Gm37227 12 113475112 to 113475121 9 - pseudogenic gene segment predicted gene, 37227
Ighd2-3 12 113475400 to 113475416 16 - gene segment immunoglobulin heavy diversity 2-3
Ighd6-1 12 113480143 to 113480171 28 - pseudogenic gene segment immunoglobulin heavy diversity 6-1
Ighd1-1 12 113482170 to 113482192 22 - gene segment immunoglobulin heavy diversity 1-1
Tssr118024 12 113482249 to 113482264 15 - TSS region transcription start site region 118024
Tssr118025 12 113482287 to 113482311 24 - TSS region transcription start site region 118025
Tssr118026 12 113482316 to 113482325 9 - TSS region transcription start site region 118026
Tssr118027 12 113482326 to 113482340 14 - TSS region transcription start site region 118027
Tssr118028 12 113482346 to 113482349 3 - TSS region transcription start site region 118028
Tssr118029 12 113482353 to 113482359 6 - TSS region transcription start site region 118029
Tssr118030 12 113482371 to 113482378 7 - TSS region transcription start site region 118030
Tssr118031 12 113482400 to 113482405 5 - TSS region transcription start site region 118031
Tssr118032 12 113482409 to 113482416 7 - TSS region transcription start site region 118032
Tssr118033 12 113482421 to 113482432 11 - TSS region transcription start site region 118033
Tssr118034 12 113482445 to 113482470 25 - TSS region transcription start site region 118034
Tssr118035 12 113482473 to 113482483 10 - TSS region transcription start site region 118035
Tssr118036 12 113482489 to 113482507 18 - TSS region transcription start site region 118036
Tssr118037 12 113482556 to 113482571 15 - TSS region transcription start site region 118037
Tssr118038 12 113482583 to 113482593 10 - TSS region transcription start site region 118038
Tssr118039 12 113482627 to 113482637 10 - TSS region transcription start site region 118039
Adam6b 12 113489565 to 113491835 2270 + protein coding gene a disintegrin and metallopeptidase domain 6B
Ighd3-1 12 113525313 to 113525329 16 - gene segment immunoglobulin heavy diversity 3-1
D12Mit263 12 113526429 to 113526541 112 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 263
Ighd5-1 12 113526800 to 113526809 9 - pseudogenic gene segment immunoglobulin heavy diversity 5-1
Gm16968 12 113528032 to 113528054 22 - gene segment predicted gene, 16968
Adam6a 12 113543908 to 113546414 2506 + protein coding gene a disintegrin and metallopeptidase domain 6A
Ighv5-1 12 113572929 to 113573222 293 - pseudogenic gene segment immunoglobulin heavy variable V5-1
Ighv2-1 12 113574247 to 113574540 293 - pseudogenic gene segment immunoglobulin heavy variable 2-1
Ighv5-2 12 113578504 to 113578990 486 - gene segment immunoglobulin heavy variable 5-2
Tssr118040 12 113579056 to 113579073 17 - TSS region transcription start site region 118040
Ighv2-2 12 113588267 to 113588700 433 - gene segment immunoglobulin heavy variable 2-2
Tssr118041 12 113588721 to 113588734 13 - TSS region transcription start site region 118041
Ighv5-3 12 113589967 to 113590243 276 - pseudogenic gene segment immunoglobulin heavy variable V5-3
Ighv5-4 12 113597448 to 113597741 293 - gene segment immunoglobulin heavy variable 5-4
Tssr118042 12 113597974 to 113597983 9 - TSS region transcription start site region 118042
Ighv6-1 12 113603460 to 113603928 468 - pseudogenic gene segment immunoglobulin heavy variable V6-1
Ighv2-3 12 113611184 to 113611476 292 - gene segment immunoglobulin heavy variable 2-3
Tssr118043 12 113611643 to 113611648 5 - TSS region transcription start site region 118043
Ighv5-5 12 113612989 to 113613442 453 - pseudogenic gene segment immunoglobulin heavy variable V5-5
Ighv5-6 12 113625508 to 113625801 293 - gene segment immunoglobulin heavy variable 5-6
Tssr118044 12 113626023 to 113626037 14 - TSS region transcription start site region 118044
Gm9517 12 113629994 to 113630867 873 - pseudogene predicted gene 9517
Ighv5-7 12 113634686 to 113634981 295 - pseudogenic gene segment immunoglobulin heavy variable V5-7
Ighv2-4 12 113653291 to 113653583 292 - gene segment immunoglobulin heavy variable V2-4
Ighv5-8 12 113654967 to 113655245 278 - pseudogenic gene segment immunoglobulin heavy variable V5-8
Ighv5-9 12 113661771 to 113662228 457 - gene segment immunoglobulin heavy variable 5-9
Tssr118045 12 113662293 to 113662309 16 - TSS region transcription start site region 118045
Ighv5-10 12 113669673 to 113669968 295 - pseudogenic gene segment immunoglobulin heavy variable 5-10
Gm37187 12 113682466 to 113682891 425 - pseudogenic gene segment predicted gene, 37187
Ighv2-5 12 113685482 to 113685774 292 - gene segment immunoglobulin heavy variable 2-5
Ighv5-11 12 113687229 to 113687505 276 - pseudogenic gene segment immunoglobulin heavy variable V5-11
Ighv5-12 12 113702126 to 113702419 293 - gene segment immunoglobulin heavy variable 5-12
Tssr118046 12 113702651 to 113702662 11 - TSS region transcription start site region 118046
Ighv2-6 12 113716672 to 113716962 290 - gene segment immunoglobulin heavy variable 2-6
Gm37976 12 113718318 to 113719231 913 - pseudogenic gene segment predicted gene, 37976
Gm37418 12 113724761 to 113725196 435 - pseudogenic gene segment predicted gene, 37418