Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:107589136-107939041

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9006 12 107613000 to 107613840 840 + pseudogene predicted gene 9006
Gm33236 12 107624195 to 107649915 25720 - lncRNA gene predicted gene, 33236
Tssr114945 12 107691066 to 107691077 11 + TSS region transcription start site region 114945
4930465M20Rik 12 107723743 to 107735488 11745 - lincRNA gene RIKEN cDNA 4930465M20 gene
D12Mit1010 12 107735177 to 107735394 217 DNA segment DNA Segment, Chr 12, Massachusetts Institute of Technology 1010
Tssr117626 12 107735490 to 107735501 11 - TSS region transcription start site region 117626
Gm15208 12 107744136 to 107784041 39905 - lincRNA gene predicted gene 15208
Gm33341 12 107824390 to 107825701 1311 + lncRNA gene predicted gene, 33341
4930440F04Rik 12 107899065 to 107899900 835 unclassified gene RIKEN cDNA 4930440F04 gene
Tssr3939 12 107903928 to 107903932 4 + TSS region transcription start site region 3939
Bcl11b 12 107910403 to 108003602 93199 - protein coding gene B cell leukemia/lymphoma 11B
Tssr117627 12 107911609 to 107911615 6 - TSS region transcription start site region 117627
Tssr117628 12 107912034 to 107912047 13 - TSS region transcription start site region 117628
Tssr117629 12 107912220 to 107912231 11 - TSS region transcription start site region 117629
Tssr117630 12 107912650 to 107912665 15 - TSS region transcription start site region 117630
Tssr117631 12 107913499 to 107913510 11 - TSS region transcription start site region 117631
Tssr117632 12 107913604 to 107913609 5 - TSS region transcription start site region 117632
Tssr117633 12 107915024 to 107915033 9 - TSS region transcription start site region 117633
Cpgi5070 12 107915227 to 107917585 2358 CpG island CpG island 5070
MCA1 12 107923581 to 107923795 214 DNA segment DNA segment, MCA1, multiple CA repeat 1
Tssr117634 12 107928873 to 107928879 6 - TSS region transcription start site region 117634
Tssr117635 12 107931308 to 107931310 2 - TSS region transcription start site region 117635
Tssr117636 12 107938646 to 107938662 16 - TSS region transcription start site region 117636
Tssr117637 12 107938672 to 107938691 19 - TSS region transcription start site region 117637
Tssr117638 12 107938737 to 107938749 12 - TSS region transcription start site region 117638
Tssr117639 12 107938752 to 107938768 16 - TSS region transcription start site region 117639
Tssr117640 12 107938773 to 107938784 11 - TSS region transcription start site region 117640
Tssr117641 12 107938793 to 107938801 8 - TSS region transcription start site region 117641
Tssr117642 12 107938830 to 107938839 9 - TSS region transcription start site region 117642
Tssr117643 12 107938948 to 107938958 10 - TSS region transcription start site region 117643