Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:103531404-103731444

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5023 12 103531978 to 103533403 1425 CpG island CpG island 5023
Ppp4r4 12 103532283 to 103613831 81548 + protein coding gene protein phosphatase 4, regulatory subunit 4
Tssr114813 12 103532435 to 103532485 50 + TSS region transcription start site region 114813
Tssr114814 12 103532486 to 103532503 17 + TSS region transcription start site region 114814
Tssr114815 12 103550359 to 103550363 4 + TSS region transcription start site region 114815
Tssr114816 12 103551679 to 103551720 41 + TSS region transcription start site region 114816
Tssr117484 12 103609790 to 103609803 13 - TSS region transcription start site region 117484
Serpina10 12 103616675 to 103631490 14815 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
Tssr117485 12 103631404 to 103631444 40 - TSS region transcription start site region 117485
Tssr114817 12 103640424 to 103640428 4 + TSS region transcription start site region 114817
Gm18501 12 103641406 to 103642069 663 - pseudogene predicted gene, 18501
Tnfp 12 103646630 to 103657212 10582 QTL tumor necrosis factor protection
Serpina6 12 103646630 to 103657212 10582 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 6
Tssr117486 12 103646989 to 103647001 12 - TSS region transcription start site region 117486
Tssr117487 12 103653491 to 103653501 10 - TSS region transcription start site region 117487
Tssr117488 12 103655052 to 103655078 26 - TSS region transcription start site region 117488
Tssr117489 12 103655857 to 103655896 39 - TSS region transcription start site region 117489
Tssr117490 12 103656365 to 103656403 38 - TSS region transcription start site region 117490
Tssr117491 12 103657095 to 103657112 17 - TSS region transcription start site region 117491
Tssr117492 12 103657123 to 103657134 11 - TSS region transcription start site region 117492
Tssr117493 12 103657159 to 103657170 11 - TSS region transcription start site region 117493
Tssr117494 12 103659889 to 103659910 21 - TSS region transcription start site region 117494
Serpina16 12 103668808 to 103676139 7331 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16
Tssr117495 12 103676718 to 103676729 11 - TSS region transcription start site region 117495
Tssr117496 12 103676765 to 103676773 8 - TSS region transcription start site region 117496
Gm46373 12 103681704 to 103688918 7214 + lncRNA gene predicted gene, 46373
Serpina1f 12 103688044 to 103695529 7485 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A, member 1F
Tssr117497 12 103694032 to 103694049 17 - TSS region transcription start site region 117497
Tssr117498 12 103694657 to 103694673 16 - TSS region transcription start site region 117498
Tssr117499 12 103694674 to 103694680 6 - TSS region transcription start site region 117499
Tssr117500 12 103694686 to 103694703 17 - TSS region transcription start site region 117500
Tssr117501 12 103694713 to 103694718 5 - TSS region transcription start site region 117501
Tssr117502 12 103695017 to 103695023 6 - TSS region transcription start site region 117502
Tssr117503 12 103695439 to 103695454 15 - TSS region transcription start site region 117503
Tssr117504 12 103695527 to 103695536 9 - TSS region transcription start site region 117504
Tssr117505 12 103695580 to 103695592 12 - TSS region transcription start site region 117505
Tssr117506 12 103701126 to 103701131 5 - TSS region transcription start site region 117506
Tssr117507 12 103701177 to 103701184 7 - TSS region transcription start site region 117507
Gm5656 12 103702271 to 103704598 2327 - pseudogene predicted gene 5656
Tssr117508 12 103707305 to 103707314 9 - TSS region transcription start site region 117508
Gm17142 12 103714549 to 103716697 2148 - pseudogene predicted gene 17142
Serpina1b 12 103728156 to 103738189 10033 - protein coding gene serine (or cysteine) preptidase inhibitor, clade A, member 1B
Tssr117509 12 103729277 to 103729297 20 - TSS region transcription start site region 117509
Tssr117510 12 103729371 to 103729391 20 - TSS region transcription start site region 117510
Tssr117511 12 103730276 to 103730304 28 - TSS region transcription start site region 117511
Tssr117512 12 103730351 to 103730370 19 - TSS region transcription start site region 117512
Tssr117513 12 103730402 to 103730424 22 - TSS region transcription start site region 117513