Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:97558634-97698647

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Srcin1 11 97509340 to 97575126 65786 - protein coding gene SRC kinase signaling inhibitor 1
Cpgi3712 11 97563859 to 97564066 207 CpG island CpG island 3712
Cpgi3713 11 97573793 to 97574028 235 CpG island CpG island 3713
Tssr110442 11 97574011 to 97574022 11 - TSS region transcription start site region 110442
Tssr110443 11 97574024 to 97574039 15 - TSS region transcription start site region 110443
Tssr110444 11 97574040 to 97574064 24 - TSS region transcription start site region 110444
Tssr110445 11 97574068 to 97574082 14 - TSS region transcription start site region 110445
Cpgi3714 11 97574189 to 97576006 1817 CpG island CpG island 3714
Tssr104636 11 97574320 to 97574333 13 + TSS region transcription start site region 104636
Tssr110446 11 97575156 to 97575208 52 - TSS region transcription start site region 110446
Tssr110447 11 97575210 to 97575236 26 - TSS region transcription start site region 110447
Tssr110448 11 97575239 to 97575256 17 - TSS region transcription start site region 110448
Tssr110449 11 97575272 to 97575275 3 - TSS region transcription start site region 110449
Tssr110450 11 97576334 to 97576355 21 - TSS region transcription start site region 110450
Tssr110451 11 97576441 to 97576449 8 - TSS region transcription start site region 110451
Tssr104637 11 97598503 to 97598524 21 + TSS region transcription start site region 104637
2410003L11Rik 11 97598511 to 97622893 24382 + lncRNA gene RIKEN cDNA 2410003L11 gene
Gm38962 11 97615355 to 97618548 3193 - lncRNA gene predicted gene, 38962
Epop 11 97627389 to 97629702 2313 - protein coding gene elongin BC and polycomb repressive complex 2 associated protein
Cpgi3715 11 97627824 to 97630250 2426 CpG island CpG island 3715
Tssr110452 11 97628610 to 97628623 13 - TSS region transcription start site region 110452
Tssr110453 11 97628634 to 97628647 13 - TSS region transcription start site region 110453
Tssr110454 11 97628902 to 97628918 16 - TSS region transcription start site region 110454
Tssr110455 11 97629259 to 97629280 21 - TSS region transcription start site region 110455
Tssr110456 11 97629294 to 97629305 11 - TSS region transcription start site region 110456
Tssr110457 11 97629366 to 97629381 15 - TSS region transcription start site region 110457
Tssr110458 11 97629669 to 97629676 7 - TSS region transcription start site region 110458
Tssr110459 11 97629685 to 97629715 30 - TSS region transcription start site region 110459
Tssr110460 11 97629717 to 97629745 28 - TSS region transcription start site region 110460
Tssr104638 11 97629841 to 97629886 45 + TSS region transcription start site region 104638
Gm11613 11 97644184 to 97660367 16183 - lncRNA gene predicted gene 11613
Tssr110461 11 97657312 to 97657323 11 - TSS region transcription start site region 110461
Tssr104639 11 97657420 to 97657476 56 + TSS region transcription start site region 104639
Tssr110462 11 97657990 to 97658001 11 - TSS region transcription start site region 110462
Tssr104640 11 97658984 to 97658997 13 + TSS region transcription start site region 104640
Cpgi3716 11 97659612 to 97660974 1362 CpG island CpG island 3716
Tssr104641 11 97659706 to 97659781 75 + TSS region transcription start site region 104641
Tssr104642 11 97659794 to 97659813 19 + TSS region transcription start site region 104642
Gm24158 11 97660257 to 97660327 70 - miRNA gene predicted gene, 24158
Tssr110463 11 97660296 to 97660351 55 - TSS region transcription start site region 110463
Tssr110464 11 97660353 to 97660401 48 - TSS region transcription start site region 110464
Tssr104643 11 97660469 to 97660500 31 + TSS region transcription start site region 104643
Tssr110465 11 97661729 to 97661754 25 - TSS region transcription start site region 110465
Tssr104644 11 97661875 to 97661878 3 + TSS region transcription start site region 104644
Tssr104645 11 97662444 to 97662462 18 + TSS region transcription start site region 104645
Tssr104646 11 97662729 to 97662746 17 + TSS region transcription start site region 104646
Cpgi3717 11 97662772 to 97664315 1543 CpG island CpG island 3717
Tssr104647 11 97663015 to 97663034 19 + TSS region transcription start site region 104647
Tssr104648 11 97663077 to 97663084 7 + TSS region transcription start site region 104648
Tssr104649 11 97663101 to 97663141 40 + TSS region transcription start site region 104649
Tssr104650 11 97663195 to 97663281 86 + TSS region transcription start site region 104650
Tssr104651 11 97663366 to 97663386 20 + TSS region transcription start site region 104651
Mllt6 11 97663412 to 97685461 22049 + protein coding gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6
Tssr110466 11 97663569 to 97663578 9 - TSS region transcription start site region 110466
Tssr110467 11 97663673 to 97663703 30 - TSS region transcription start site region 110467
Tssr110468 11 97664756 to 97664766 10 - TSS region transcription start site region 110468
Tssr110469 11 97664803 to 97664832 29 - TSS region transcription start site region 110469
Mir6927 11 97677060 to 97677130 70 + miRNA gene microRNA 6927
Tssr104652 11 97683106 to 97683111 5 + TSS region transcription start site region 104652
Cpgi3718 11 97685569 to 97685970 401 CpG island CpG island 3718
Tssr104653 11 97685794 to 97685845 51 + TSS region transcription start site region 104653
Cisd3 11 97685826 to 97688621 2795 + protein coding gene CDGSH iron sulfur domain 3
Tssr104654 11 97685903 to 97685966 63 + TSS region transcription start site region 104654
Tssr110470 11 97687206 to 97687230 24 - TSS region transcription start site region 110470
Pcgf2 11 97688823 to 97700497 11674 - protein coding gene polycomb group ring finger 2
Tssr110471 11 97690108 to 97690165 57 - TSS region transcription start site region 110471
Tssr110472 11 97690343 to 97690358 15 - TSS region transcription start site region 110472
Cpgi3719 11 97698596 to 97701156 2560 CpG island CpG island 3719