Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:89108523-89698539

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scc6 11 6930277 to 89128908 82198631 QTL colon tumor susceptibility 6
Gm38759 11 89121390 to 89124467 3077 + lncRNA gene predicted gene, 38759
Gm11497 11 89124456 to 89126706 2250 - lincRNA gene predicted gene 11497
D11Mit284 11 89128823 to 89128908 85 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 284
Sbmd4 11 89128823 to 89128908 85 QTL spinal bone mineral density 4
Gm24734 11 89136505 to 89136766 261 - unclassified non-coding RNA gene predicted gene, 24734
Cpgi3526 11 89298109 to 89298830 721 CpG island CpG island 3526
Cpgi3527 11 89299265 to 89299630 365 CpG island CpG island 3527
Nog 11 89300638 to 89302332 1694 - protein coding gene noggin
Cpgi3528 11 89301282 to 89303597 2315 CpG island CpG island 3528
Tssr110068 11 89302545 to 89302567 22 - TSS region transcription start site region 110068
Gm2018 11 89302723 to 89309428 6705 + lincRNA gene predicted gene 2018
Gm42088 11 89372249 to 89384963 12714 + lncRNA gene predicted gene, 42088
Ankfn1 11 89386933 to 89733723 346790 - protein coding gene ankyrin-repeat and fibronectin type III domain containing 1
Cpgi3529 11 89391928 to 89392159 231 CpG island CpG island 3529
Tssr110069 11 89403510 to 89403519 9 - TSS region transcription start site region 110069
Tssr110070 11 89403523 to 89403539 16 - TSS region transcription start site region 110070
Tssr110071 11 89696850 to 89696873 23 - TSS region transcription start site region 110071
Gm46291 11 89697060 to 89710167 13107 + lncRNA gene predicted gene, 46291