Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ity2 | 11 | 29187208 | QTL | immunity to S. typhimurium 2 | ||
Pid3 | 11 | 27012908 | QTL | prion incubation determinant 3 | ||
Gm33742 | 11 | 48970 | - | lncRNA gene | predicted gene, 33742 | |
Tssr109927 | 11 | 4 | - | TSS region | transcription start site region 109927 | |
Gm38942 | 11 | 8841 | + | lncRNA gene | predicted gene, 38942 | |
Tssr109928 | 11 | 28 | - | TSS region | transcription start site region 109928 | |
Tssr103900 | 11 | 29 | + | TSS region | transcription start site region 103900 | |
Tssr109929 | 11 | 15 | - | TSS region | transcription start site region 109929 | |
Tssr103901 | 11 | 11 | + | TSS region | transcription start site region 103901 | |
Tssr109930 | 11 | 3 | - | TSS region | transcription start site region 109930 | |
Gm46290 | 11 | 3497 | + | protein coding gene | predicted gene, 46290 | |
Cpgi3479 | 11 | 350 | CpG island | CpG island 3479 | ||
Tssr103902 | 11 | 4 | + | TSS region | transcription start site region 103902 | |
D11Mit282 | 11 | 125 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 282 | ||
Ypel2 | 11 | 57282 | - | protein coding gene | yippee like 2 | |
4930406D14Rik | 11 | 2293 | unclassified gene | RIKEN cDNA 4930406D14 gene | ||
Cpgi3480 | 11 | 1281 | CpG island | CpG island 3480 | ||
Tssr109931 | 11 | 10 | - | TSS region | transcription start site region 109931 | |
Tssr109932 | 11 | 22 | - | TSS region | transcription start site region 109932 | |
Tssr109933 | 11 | 23 | - | TSS region | transcription start site region 109933 | |
Tssr109934 | 11 | 56 | - | TSS region | transcription start site region 109934 | |
Tssr109935 | 11 | 19 | - | TSS region | transcription start site region 109935 | |
Gm22387 | 11 | 130 | - | snoRNA gene | predicted gene, 22387 | |
Tssr103903 | 11 | 5 | + | TSS region | transcription start site region 103903 | |
Tssr109936 | 11 | 21 | - | TSS region | transcription start site region 109936 | |
Tssr103904 | 11 | 14 | + | TSS region | transcription start site region 103904 | |
Tssr109937 | 11 | 29 | - | TSS region | transcription start site region 109937 | |
Gdpd1 | 11 | 40195 | - | protein coding gene | glycerophosphodiester phosphodiesterase domain containing 1 | |
Tssr109938 | 11 | 3 | - | TSS region | transcription start site region 109938 | |
Tssr109939 | 11 | 15 | - | TSS region | transcription start site region 109939 | |
Tssr109940 | 11 | 20 | - | TSS region | transcription start site region 109940 | |
D11Dcr15 | 11 | 138 | DNA segment | DNA Segment, Chr 11, Derry C. Roopenian 15 | ||
D11Mit325 | 11 | 123 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology 325 | ||
Cpgi3481 | 11 | 1108 | CpG island | CpG island 3481 | ||
Tssr109941 | 11 | 16 | - | TSS region | transcription start site region 109941 | |
Tssr109942 | 11 | 43 | - | TSS region | transcription start site region 109942 | |
Tssr109943 | 11 | 11 | - | TSS region | transcription start site region 109943 | |
Gm11479 | 11 | 701 | - | lincRNA gene | predicted gene 11479 | |
Smg8 | 11 | 9042 | - | protein coding gene | smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) | |
Gm9378 | 11 | 470 | + | pseudogene | predicted gene 9378 | |
Cpgi3482 | 11 | 727 | CpG island | CpG island 3482 | ||
Tssr109944 | 11 | 11 | - | TSS region | transcription start site region 109944 | |
Tssr109945 | 11 | 29 | - | TSS region | transcription start site region 109945 | |
Prr11 | 11 | 19555 | - | protein coding gene | proline rich 11 | |
Tssr109946 | 11 | 63 | - | TSS region | transcription start site region 109946 | |
Cpgi3483 | 11 | 1487 | CpG island | CpG island 3483 | ||
Tssr109947 | 11 | 23 | - | TSS region | transcription start site region 109947 | |
Tssr109948 | 11 | 17 | - | TSS region | transcription start site region 109948 | |
Tssr103905 | 11 | 14 | + | TSS region | transcription start site region 103905 | |
Tssr103906 | 11 | 18 | + | TSS region | transcription start site region 103906 | |
Tssr103907 | 11 | 22 | + | TSS region | transcription start site region 103907 | |
Ska2 | 11 | 13713 | + | protein coding gene | spindle and kinetochore associated complex subunit 2 | |
Tssr103908 | 11 | 23 | + | TSS region | transcription start site region 103908 | |
Mir301 | 11 | 85 | + | miRNA gene | microRNA 301 | |
Tssr103909 | 11 | 2 | + | TSS region | transcription start site region 103909 | |
Gm11491 | 11 | 5391 | - | antisense lncRNA gene | predicted gene 11491 | |
Tssr103910 | 11 | 3 | + | TSS region | transcription start site region 103910 | |
Tssr109949 | 11 | 1 | - | TSS region | transcription start site region 109949 | |
Cpgi3484 | 11 | 1169 | CpG island | CpG island 3484 | ||
Tssr103911 | 11 | 9 | + | TSS region | transcription start site region 103911 | |
Tssr103912 | 11 | 53 | + | TSS region | transcription start site region 103912 | |
Trim37 | 11 | 93606 | + | protein coding gene | tripartite motif-containing 37 | |
Tssr103913 | 11 | 25 | + | TSS region | transcription start site region 103913 | |
Tssr103914 | 11 | 7 | + | TSS region | transcription start site region 103914 | |
Tssr103915 | 11 | 92 | + | TSS region | transcription start site region 103915 | |
Tssr103916 | 11 | 12 | + | TSS region | transcription start site region 103916 | |
Tssr109950 | 11 | 13 | - | TSS region | transcription start site region 109950 | |
Tssr103917 | 11 | 21 | + | TSS region | transcription start site region 103917 | |
Tssr103918 | 11 | 15 | + | TSS region | transcription start site region 103918 | |
Tssr103919 | 11 | 7 | + | TSS region | transcription start site region 103919 | |
Tssr109951 | 11 | 44 | - | TSS region | transcription start site region 109951 | |
Ppm1e | 11 | 132088 | - | protein coding gene | protein phosphatase 1E (PP2C domain containing) | |
Tssr109952 | 11 | 4 | - | TSS region | transcription start site region 109952 | |
Tssr109953 | 11 | 25 | - | TSS region | transcription start site region 109953 | |
Tssr109954 | 11 | 14 | - | TSS region | transcription start site region 109954 | |
Gm11490 | 11 | 271 | + | pseudogene | predicted gene 11490 | |
Gm22883 | 11 | 105 | - | snRNA gene | predicted gene, 22883 | |
Tssr109955 | 11 | 4 | - | TSS region | transcription start site region 109955 | |
Tssr109956 | 11 | 12 | - | TSS region | transcription start site region 109956 | |
Tssr103920 | 11 | 19 | + | TSS region | transcription start site region 103920 | |
Tssr103921 | 11 | 7 | + | TSS region | transcription start site region 103921 | |
5830426K05Rik | 11 | 3126 | unclassified gene | RIKEN cDNA 5830426K05 gene | ||
Tssr109957 | 11 | 8 | - | TSS region | transcription start site region 109957 | |
Gm33937 | 11 | 4221 | + | lncRNA gene | predicted gene, 33937 | |
Cpgi3485 | 11 | 1314 | CpG island | CpG island 3485 | ||
Tssr109958 | 11 | 37 | - | TSS region | transcription start site region 109958 | |
Tssr109959 | 11 | 70 | - | TSS region | transcription start site region 109959 | |
Tssr109960 | 11 | 7 | - | TSS region | transcription start site region 109960 | |
Rad51c | 11 | 27347 | - | protein coding gene | RAD51 paralog C | |
Cpgi3486 | 11 | 1216 | CpG island | CpG island 3486 | ||
Tssr109961 | 11 | 44 | - | TSS region | transcription start site region 109961 | |
Tssr109962 | 11 | 43 | - | TSS region | transcription start site region 109962 | |
Tssr103922 | 11 | 9 | + | TSS region | transcription start site region 103922 | |
Tssr103923 | 11 | 64 | + | TSS region | transcription start site region 103923 | |
Tex14 | 11 | 150758 | + | protein coding gene | testis expressed gene 14 | |
Tssr109963 | 11 | 11 | - | TSS region | transcription start site region 109963 | |
Rnu1a1 | 11 | 163 | + | snRNA gene | U1a1 small nuclear RNA | |
Gm22068 | 11 | 163 | + | snRNA gene | predicted gene, 22068 | |
Tssr103924 | 11 | 42 | + | TSS region | transcription start site region 103924 | |
Cpgi3487 | 11 | 200 | CpG island | CpG island 3487 | ||
Rnu3b1 | 11 | 214 | + | snRNA gene | U3B small nuclear RNA 1 | |
Gm23137 | 11 | 106 | - | snRNA gene | predicted gene, 23137 | |
Tssr103925 | 11 | 4 | + | TSS region | transcription start site region 103925 | |
Cpgi3488 | 11 | 183 | CpG island | CpG island 3488 | ||
Rnu3b3 | 11 | 214 | + | snRNA gene | U3B small nuclear RNA 3 | |
D11Mit56 | 11 | 182 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 56 | ||
Cpgi3489 | 11 | 292 | CpG island | CpG island 3489 | ||
Rnu3b4 | 11 | 217 | + | snRNA gene | U3B small nuclear RNA 4 | |
Gm11489 | 11 | 1379 | + | pseudogene | predicted gene 11489 | |
Cpgi3490 | 11 | 252 | CpG island | CpG island 3490 | ||
Rnu3b2 | 11 | 214 | + | snRNA gene | U3B small nuclear RNA 2 | |
Tssr103926 | 11 | 11 | + | TSS region | transcription start site region 103926 | |
Tssr103927 | 11 | 8 | + | TSS region | transcription start site region 103927 | |
D11Mit158 | 11 | 149 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 158 | ||
D11Mit323 | 11 | 124 | DNA segment | DNA Segment, Chr 11, Massachusetts Institute of Technology 323 | ||
Gm34000 | 11 | 18765 | - | lncRNA gene | predicted gene, 34000 | |
Tssr109964 | 11 | 20 | - | TSS region | transcription start site region 109964 | |
Gm11492 | 11 | 2597 | + | protein coding gene | predicted gene 11492 | |
Tssr103928 | 11 | 5 | + | TSS region | transcription start site region 103928 | |
Tssr103929 | 11 | 3 | + | TSS region | transcription start site region 103929 | |
Tssr103930 | 11 | 30 | + | TSS region | transcription start site region 103930 | |
Tssr103931 | 11 | 14 | + | TSS region | transcription start site region 103931 | |
Sept4 | 11 | 21636 | + | protein coding gene | septin 4 | |
Cpgi3491 | 11 | 528 | CpG island | CpG island 3491 | ||
Tssr103932 | 11 | 86 | + | TSS region | transcription start site region 103932 | |
Tssr103933 | 11 | 15 | + | TSS region | transcription start site region 103933 | |
Tssr103934 | 11 | 2 | + | TSS region | transcription start site region 103934 | |
Tssr103935 | 11 | 22 | + | TSS region | transcription start site region 103935 | |
Tssr103936 | 11 | 19 | + | TSS region | transcription start site region 103936 | |
Tssr103937 | 11 | 7 | + | TSS region | transcription start site region 103937 | |
Tssr103938 | 11 | 14 | + | TSS region | transcription start site region 103938 | |
Tssr103939 | 11 | 11 | + | TSS region | transcription start site region 103939 | |
Tssr103940 | 11 | 14 | + | TSS region | transcription start site region 103940 | |
Cpgi3492 | 11 | 1483 | CpG island | CpG island 3492 | ||
Tssr109965 | 11 | 4 | - | TSS region | transcription start site region 109965 | |
Tssr109966 | 11 | 11 | - | TSS region | transcription start site region 109966 | |
Tssr109967 | 11 | 22 | - | TSS region | transcription start site region 109967 | |
Tssr103941 | 11 | 84 | + | TSS region | transcription start site region 103941 | |
Mtmr4 | 11 | 24140 | + | protein coding gene | myotubularin related protein 4 | |
Tssr103942 | 11 | 31 | + | TSS region | transcription start site region 103942 | |
Tssr103943 | 11 | 62 | + | TSS region | transcription start site region 103943 | |
Tssr103944 | 11 | 4 | + | TSS region | transcription start site region 103944 | |
Cpgi3493 | 11 | 802 | CpG island | CpG island 3493 | ||
Tssr103945 | 11 | 13 | + | TSS region | transcription start site region 103945 | |
Tssr103946 | 11 | 55 | + | TSS region | transcription start site region 103946 | |
Cpgi3494 | 11 | 1189 | CpG island | CpG island 3494 | ||
Tssr103947 | 11 | 13 | + | TSS region | transcription start site region 103947 | |
Hsf5 | 11 | 42378 | + | protein coding gene | heat shock transcription factor family member 5 | |
Tssr103948 | 11 | 24 | + | TSS region | transcription start site region 103948 | |
Tssr103949 | 11 | 11 | + | TSS region | transcription start site region 103949 | |
Tssr103950 | 11 | 21 | + | TSS region | transcription start site region 103950 | |
Tssr103951 | 11 | 5 | + | TSS region | transcription start site region 103951 | |
Cpgi3495 | 11 | 436 | CpG island | CpG island 3495 | ||
Tssr103952 | 11 | 5 | + | TSS region | transcription start site region 103952 | |
Tssr103953 | 11 | 62 | + | TSS region | transcription start site region 103953 | |
Tssr103954 | 11 | 14 | + | TSS region | transcription start site region 103954 | |
Tssr3628 | 11 | 11 | + | TSS region | transcription start site region 3628 | |
Rnf43 | 11 | 72452 | + | protein coding gene | ring finger protein 43 | |
Tssr3629 | 11 | 3 | + | TSS region | transcription start site region 3629 | |
Gm25968 | 11 | 99 | - | snRNA gene | predicted gene, 25968 | |
Tssr103955 | 11 | 19 | + | TSS region | transcription start site region 103955 | |
1110028F11Rik | 11 | 3935 | + | sense intronic lncRNA gene | RIKEN cDNA 1110028F11 gene | |
Tssr3630 | 11 | 5 | - | TSS region | transcription start site region 3630 | |
Tssr109968 | 11 | 11 | - | TSS region | transcription start site region 109968 | |
Cpgi3496 | 11 | 1275 | CpG island | CpG island 3496 | ||
Tssr103956 | 11 | 36 | + | TSS region | transcription start site region 103956 | |
Supt4a | 11 | 6071 | + | protein coding gene | suppressor of Ty 4A | |
Tssr103957 | 11 | 17 | + | TSS region | transcription start site region 103957 | |
Tssr103958 | 11 | 12 | + | TSS region | transcription start site region 103958 | |
Tssr109969 | 11 | 29 | - | TSS region | transcription start site region 109969 | |
Tssr109970 | 11 | 16 | - | TSS region | transcription start site region 109970 | |
Tssr103959 | 11 | 15 | + | TSS region | transcription start site region 103959 | |
Tssr109971 | 11 | 17 | - | TSS region | transcription start site region 109971 | |
Tssr109972 | 11 | 29 | - | TSS region | transcription start site region 109972 | |
Tssr103960 | 11 | 19 | + | TSS region | transcription start site region 103960 | |
Tssr103961 | 11 | 23 | + | TSS region | transcription start site region 103961 | |
Tssr103962 | 11 | 25 | + | TSS region | transcription start site region 103962 | |
Tssr109973 | 11 | 19 | - | TSS region | transcription start site region 109973 | |
Tssr109974 | 11 | 21 | - | TSS region | transcription start site region 109974 | |
Tssr103963 | 11 | 18 | + | TSS region | transcription start site region 103963 | |
Tssr103964 | 11 | 24 | + | TSS region | transcription start site region 103964 | |
Tssr103965 | 11 | 16 | + | TSS region | transcription start site region 103965 | |
Tssr103966 | 11 | 11 | + | TSS region | transcription start site region 103966 | |
Tssr103967 | 11 | 21 | + | TSS region | transcription start site region 103967 | |
Mir142hg | 11 | 1693 | + | lincRNA gene | Mir142 host gene (non-protein coding) | |
Tssr103968 | 11 | 12 | + | TSS region | transcription start site region 103968 | |
Tssr103969 | 11 | 4 | + | TSS region | transcription start site region 103969 | |
Tssr103970 | 11 | 37 | + | TSS region | transcription start site region 103970 | |
Cpgi3497 | 11 | 549 | CpG island | CpG island 3497 | ||
Mir142b | 11 | 114 | - | miRNA gene | microRNA 142b | |
Mir142 | 11 | 63 | + | miRNA gene | microRNA 142 | |
Tssr103971 | 11 | 4 | + | TSS region | transcription start site region 103971 | |
Tssr109975 | 11 | 4 | - | TSS region | transcription start site region 109975 | |
Tssr103972 | 11 | 18 | + | TSS region | transcription start site region 103972 | |
Tspoap1 | 11 | 25387 | + | protein coding gene | TSPO associated protein 1 | |
Cpgi3498 | 11 | 162 | CpG island | CpG island 3498 | ||
Tssr103973 | 11 | 5 | + | TSS region | transcription start site region 103973 | |
Tssr103974 | 11 | 5 | + | TSS region | transcription start site region 103974 | |
Tssr103975 | 11 | 21 | + | TSS region | transcription start site region 103975 | |
Cpgi3499 | 11 | 1576 | CpG island | CpG island 3499 |