MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:85428427-85738528

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr103835	11	85492720 to 85492732	12	+	TSS region	transcription start site region 103835
Tssr103836	11	85492737 to 85492751	14	+	TSS region	transcription start site region 103836
Gm23765	11	85493759 to 85493905	146	+	snRNA gene	predicted gene, 23765
Tssr109811	11	85524944 to 85524951	7	-	TSS region	transcription start site region 109811
Tssr109812	11	85546641 to 85546642	1	-	TSS region	transcription start site region 109812
Tssr103837	11	85549592 to 85549595	3	+	TSS region	transcription start site region 103837
D11Mit324	11	85583427 to 85583528	101		DNA segment	DNA Segment, Chr 11, Massachusetts Institute of Technology 324
D11Mit220	11	85583428 to 85583540	112		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 220
D11Mit324.2	11	85583506 to 85583678	172		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 324.2
7030407E18Rik	11	85598479 to 85602216	3737		unclassified gene	RIKEN cDNA 7030407E18 gene
Tssr103838	11	85614820 to 85614824	4	+	TSS region	transcription start site region 103838
Tssr103839	11	85683852 to 85683867	15	+	TSS region	transcription start site region 103839
Tssr103840	11	85688323 to 85688326	3	+	TSS region	transcription start site region 103840
Bcas3os1	11	85702200 to 85719744	17544	-	antisense lncRNA gene	breast carcinoma amplified sequence 3, opposite strand 1
Tssr103841	11	85713763 to 85713803	40	+	TSS region	transcription start site region 103841
Tssr109813	11	85719737 to 85719750	13	-	TSS region	transcription start site region 109813