MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:84908891-84986103

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Myo19	11	84880192 to 84911131	30939	+	protein coding gene	myosin XIX
Znhit3	11	84910950 to 84916356	5406	-	protein coding gene	zinc finger, HIT type 3
Cpgi3447	11	84915985 to 84916485	500		CpG island	CpG island 3447
Tssr109797	11	84916234 to 84916260	26	-	TSS region	transcription start site region 109797
Tssr109798	11	84916338 to 84916371	33	-	TSS region	transcription start site region 109798
D11Mit221	11	84929345 to 84929451	106		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 221
Gm33028	11	84940261 to 84943855	3594	+	lncRNA gene	predicted gene, 33028
Gm32917	11	84943891 to 84951103	7212	-	lncRNA gene	predicted gene, 32917
Cpgi3448	11	84943960 to 84944153	193		CpG island	CpG island 3448
Tssr109799	11	84944789 to 84944800	11	-	TSS region	transcription start site region 109799
Tssr103813	11	84944914 to 84944921	7	+	TSS region	transcription start site region 103813
Cpgi3449	11	84957521 to 84958385	864		CpG island	CpG island 3449
Tssr103814	11	84957775 to 84957799	24	+	TSS region	transcription start site region 103814
Car4	11	84957786 to 84966044	8258	+	protein coding gene	carbonic anhydrase 4
Tssr103815	11	84957802 to 84957813	11	+	TSS region	transcription start site region 103815
Tssr103816	11	84957817 to 84957835	18	+	TSS region	transcription start site region 103816
D11Mit121	11	84970026 to 84970145	119		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 121
Usp32	11	84984437 to 85140042	155605	-	protein coding gene	ubiquitin specific peptidase 32