Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83729532-83849565

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pregq1 11 54235926 to 83842826 29606900 QTL pregnancy QTL 1
Tssr103752 11 83731343 to 83731348 5 + TSS region transcription start site region 103752
Tssr109732 11 83737307 to 83737319 12 - TSS region transcription start site region 109732
Tssr103753 11 83740645 to 83740659 14 + TSS region transcription start site region 103753
Tssr103754 11 83740674 to 83740677 3 + TSS region transcription start site region 103754
Tssr103755 11 83740706 to 83740741 35 + TSS region transcription start site region 103755
Tssr103756 11 83740747 to 83740764 17 + TSS region transcription start site region 103756
Tssr3614 11 83743823 to 83743845 22 + TSS region transcription start site region 3614
1700018H16Rik 11 83744430 to 83744866 436 unclassified gene RIKEN cDNA 1700018H16 gene
Tssr103757 11 83746366 to 83746386 20 + TSS region transcription start site region 103757
Wfdc21 11 83746940 to 83752642 5702 + protein coding gene WAP four-disulfide core domain 21
Tssr103758 11 83746989 to 83747006 17 + TSS region transcription start site region 103758
Tssr103759 11 83748276 to 83748318 42 + TSS region transcription start site region 103759
Cpgi3419 11 83753449 to 83754317 868 CpG island CpG island 3419
Tssr109733 11 83753633 to 83753653 20 - TSS region transcription start site region 109733
Tssr103760 11 83753689 to 83753722 33 + TSS region transcription start site region 103760
Heatr6 11 83753696 to 83783754 30058 + protein coding gene HEAT repeat containing 6
Gm22311 11 83764638 to 83764747 109 - rRNA gene predicted gene, 22311
Tssr103761 11 83771975 to 83771979 4 + TSS region transcription start site region 103761
Tssr3615 11 83789532 to 83789565 33 + TSS region transcription start site region 3615
Gm11434 11 83800464 to 83801089 625 + pseudogene predicted gene 11434
Gm38934 11 83804271 to 83811040 6769 - lncRNA gene predicted gene, 38934
Gm12576 11 83817682 to 83849493 31811 - lincRNA gene predicted gene 12576
13.MMHAP35FLE1.seq 11 83831547 to 83831723 176 DNA segment DNA segment, 13.MMHAP35FLE1.seq
Tssr109734 11 83832094 to 83832095 1 - TSS region transcription start site region 109734
Lgth6 11 83842594 to 83842826 232 QTL body length 6
Si5lq6 11 83842594 to 83842826 232 QTL serum IGFBP-5 level QTL 6
D11Mit36 11 83842594 to 83842826 232 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 36
Pcir2 11 83842594 to 83842826 232 QTL periosteal circumference 2
Prdt3 11 83842594 to 83842826 232 QTL prion disease incubation time 3
Femwf6 11 83842594 to 83842826 232 QTL femur work to failure 6
Tbbmd5 11 83842594 to 83842826 232 QTL total body bone mineral density 5
Gm23211 11 83844665 to 83844972 307 + unclassified non-coding RNA gene predicted gene, 23211
Cpgi3420 11 83849406 to 83849781 375 CpG island CpG island 3420