Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83604349-83694365

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
E230016K23Rik 11 83582061 to 83623693 41632 + lncRNA gene RIKEN cDNA E230016K23 gene
Gm38933 11 83594426 to 83604745 10319 - lncRNA gene predicted gene, 38933
Tssr109716 11 83604693 to 83604702 9 - TSS region transcription start site region 109716
Tssr109717 11 83604719 to 83604760 41 - TSS region transcription start site region 109717
Tssr3611 11 83604829 to 83604836 7 - TSS region transcription start site region 3611
Tssr3612 11 83604966 to 83604976 10 + TSS region transcription start site region 3612
Tssr3613 11 83605613 to 83605649 36 - TSS region transcription start site region 3613
Tssr103719 11 83639731 to 83639738 7 + TSS region transcription start site region 103719
Tssr109718 11 83640192 to 83640203 11 - TSS region transcription start site region 109718
Tssr103720 11 83640465 to 83640476 11 + TSS region transcription start site region 103720
Tssr103721 11 83640501 to 83640508 7 + TSS region transcription start site region 103721
Rpl9-ps1 11 83645046 to 83645621 575 - pseudogene ribosomal protein L9, pseudogene 1
Ccl3 11 83647844 to 83649355 1511 - protein coding gene chemokine (C-C motif) ligand 3
Tssr109719 11 83647976 to 83648002 26 - TSS region transcription start site region 109719
Tssr109720 11 83648075 to 83648086 11 - TSS region transcription start site region 109720
Tssr109721 11 83648095 to 83648199 104 - TSS region transcription start site region 109721
Tssr103722 11 83648128 to 83648142 14 + TSS region transcription start site region 103722
Tssr103723 11 83648157 to 83648162 5 + TSS region transcription start site region 103723
Tssr103724 11 83648182 to 83648209 27 + TSS region transcription start site region 103724
Tssr103725 11 83648217 to 83648222 5 + TSS region transcription start site region 103725
Tssr109722 11 83648219 to 83648239 20 - TSS region transcription start site region 109722
Tssr103726 11 83648228 to 83648239 11 + TSS region transcription start site region 103726
Tssr109723 11 83648282 to 83648293 11 - TSS region transcription start site region 109723
Tssr109724 11 83648399 to 83648445 46 - TSS region transcription start site region 109724
Tssr103727 11 83648528 to 83648531 3 + TSS region transcription start site region 103727
Tssr103728 11 83648541 to 83648544 3 + TSS region transcription start site region 103728
Tssr103729 11 83648580 to 83648591 11 + TSS region transcription start site region 103729
Tssr109725 11 83648598 to 83648605 7 - TSS region transcription start site region 109725
Tssr103730 11 83648601 to 83648606 5 + TSS region transcription start site region 103730
Tssr109726 11 83648618 to 83648643 25 - TSS region transcription start site region 109726
Tssr103731 11 83648632 to 83648648 16 + TSS region transcription start site region 103731
Tssr109727 11 83648660 to 83648687 27 - TSS region transcription start site region 109727
Tssr109728 11 83649046 to 83649056 10 - TSS region transcription start site region 109728
Tssr109729 11 83649084 to 83649090 6 - TSS region transcription start site region 109729
Tssr109730 11 83649349 to 83649365 16 - TSS region transcription start site region 109730
D11Dcr14 11 83650643 to 83650798 155 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 14
Tssr103732 11 83656075 to 83656089 14 + TSS region transcription start site region 103732
Tssr109731 11 83657417 to 83657426 9 - TSS region transcription start site region 109731
Tssr103733 11 83662534 to 83662544 10 + TSS region transcription start site region 103733
Tssr103734 11 83662556 to 83662559 3 + TSS region transcription start site region 103734
Tssr103735 11 83662579 to 83662594 15 + TSS region transcription start site region 103735
Ccl4 11 83662584 to 83664683 2099 + protein coding gene chemokine (C-C motif) ligand 4
Tssr103736 11 83663445 to 83663473 28 + TSS region transcription start site region 103736
Tssr103737 11 83663474 to 83663477 3 + TSS region transcription start site region 103737
Tssr103738 11 83663480 to 83663500 20 + TSS region transcription start site region 103738
Tssr103739 11 83663571 to 83663579 8 + TSS region transcription start site region 103739
Tssr103740 11 83664305 to 83664339 34 + TSS region transcription start site region 103740
Tssr103741 11 83664388 to 83664483 95 + TSS region transcription start site region 103741
Tssr103742 11 83664485 to 83664513 28 + TSS region transcription start site region 103742
Tssr103743 11 83664565 to 83664577 12 + TSS region transcription start site region 103743
Tssr103744 11 83664599 to 83664612 13 + TSS region transcription start site region 103744
Tssr103745 11 83677507 to 83677511 4 + TSS region transcription start site region 103745
Gm11433 11 83677518 to 83678345 827 + pseudogene predicted gene 11433
Gm11438 11 83681538 to 83681726 188 - pseudogene predicted gene 11438
Atp5k-ps3 11 83681538 to 83681671 133 - pseudogene ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E, pseudogene 3
D11Bhm145 11 83685093 to 83685177 84 DNA segment DNA segment, Chr 11, Boehm 145
Gm11432 11 83687610 to 83688456 846 + pseudogene predicted gene 11432