Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:83453086-83526743

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mmp28 11 83440768 to 83463040 22272 - protein coding gene matrix metallopeptidase 28 (epilysin)
Cpgi3417 11 83462413 to 83463289 876 CpG island CpG island 3417
Tssr109659 11 83462981 to 83463038 57 - TSS region transcription start site region 109659
Cpgi3418 11 83472610 to 83473808 1198 CpG island CpG island 3418
Tssr103703 11 83473079 to 83473123 44 + TSS region transcription start site region 103703
Taf15 11 83473086 to 83506743 33657 + protein coding gene TATA-box binding protein associated factor 15
Tssr103704 11 83473140 to 83473157 17 + TSS region transcription start site region 103704
Tssr103705 11 83490608 to 83490612 4 + TSS region transcription start site region 103705
Tssr103706 11 83500108 to 83500117 9 + TSS region transcription start site region 103706
Gm32650 11 83511305 to 83546540 35235 + lncRNA gene predicted gene, 32650
Heatr9 11 83511736 to 83522175 10439 - protein coding gene HEAT repeat containing 9
Gm23247 11 83521156 to 83521262 106 + snRNA gene predicted gene, 23247
Tssr109660 11 83522102 to 83522109 7 - TSS region transcription start site region 109660
Tssr109661 11 83522126 to 83522140 14 - TSS region transcription start site region 109661
Tssr109662 11 83524729 to 83524734 5 - TSS region transcription start site region 109662
Tssr103707 11 83525777 to 83525788 11 + TSS region transcription start site region 103707
Ccl5 11 83525778 to 83530518 4740 - protein coding gene chemokine (C-C motif) ligand 5
Tssr103708 11 83525804 to 83525823 19 + TSS region transcription start site region 103708
Tssr109663 11 83525821 to 83525829 8 - TSS region transcription start site region 109663
Tssr109664 11 83525846 to 83525875 29 - TSS region transcription start site region 109664
Tssr109665 11 83525879 to 83525908 29 - TSS region transcription start site region 109665
Tssr109666 11 83525918 to 83525993 75 - TSS region transcription start site region 109666
Tssr103709 11 83525955 to 83525980 25 + TSS region transcription start site region 103709
Tssr103710 11 83525984 to 83525999 15 + TSS region transcription start site region 103710
Tssr109667 11 83525994 to 83526021 27 - TSS region transcription start site region 109667
Tssr103711 11 83526003 to 83526027 24 + TSS region transcription start site region 103711
Tssr109668 11 83526025 to 83526070 45 - TSS region transcription start site region 109668
Tssr109669 11 83526503 to 83526515 12 - TSS region transcription start site region 109669