Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:82963749-83043760

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slfn5 11 82951349 to 82964840 13491 + protein coding gene schlafen 5
Tssr103615 11 82964086 to 82964095 9 + TSS region transcription start site region 103615
Tssr103616 11 82964519 to 82964528 9 + TSS region transcription start site region 103616
Tssr103617 11 82964560 to 82964580 20 + TSS region transcription start site region 103617
Tssr103618 11 82964588 to 82964598 10 + TSS region transcription start site region 103618
Cpgi3407 11 82970899 to 82971179 280 CpG island CpG island 3407
Gm11424 11 82971092 to 82971920 828 + pseudogene predicted gene 11424
1190001M18Rik 11 82974316 to 82975585 1269 - lincRNA gene RIKEN cDNA 1190001M18 gene
Slfn9 11 82978390 to 82991830 13440 - protein coding gene schlafen 9
Tssr109600 11 82979975 to 82979979 4 - TSS region transcription start site region 109600
D11Pas78 11 82982751 to 82983307 556 DNA segment DNA segment, Chr 11, Pasteur Institute 78
Mir7679 11 82985003 to 82985065 62 - miRNA gene microRNA 7679
Tssr109601 11 82991105 to 82991171 66 - TSS region transcription start site region 109601
Tssr109602 11 82991740 to 82991782 42 - TSS region transcription start site region 109602
Tssr109603 11 82991787 to 82991838 51 - TSS region transcription start site region 109603
Slfn8 11 83002158 to 83020810 18652 - protein coding gene schlafen 8
Tssr109604 11 83002220 to 83002236 16 - TSS region transcription start site region 109604
Tssr109605 11 83002553 to 83002564 11 - TSS region transcription start site region 109605
Tssr109606 11 83002576 to 83002593 17 - TSS region transcription start site region 109606
Tssr109607 11 83002642 to 83002686 44 - TSS region transcription start site region 109607
Tssr109608 11 83003056 to 83003076 20 - TSS region transcription start site region 109608
Tssr109609 11 83003096 to 83003109 13 - TSS region transcription start site region 109609
Tssr109610 11 83003528 to 83003548 20 - TSS region transcription start site region 109610
Tssr109611 11 83003626 to 83003639 13 - TSS region transcription start site region 109611
Tssr109612 11 83003659 to 83003676 17 - TSS region transcription start site region 109612
Tssr109613 11 83003726 to 83003737 11 - TSS region transcription start site region 109613
Tssr109614 11 83003749 to 83003760 11 - TSS region transcription start site region 109614
Tssr109615 11 83004389 to 83004402 13 - TSS region transcription start site region 109615
Tssr109616 11 83005148 to 83005173 25 - TSS region transcription start site region 109616
Tssr109617 11 83012135 to 83012147 12 - TSS region transcription start site region 109617
Tssr109618 11 83012211 to 83012289 78 - TSS region transcription start site region 109618
Tssr109619 11 83012415 to 83012426 11 - TSS region transcription start site region 109619
Tssr109620 11 83012448 to 83012465 17 - TSS region transcription start site region 109620
Tssr109621 11 83012467 to 83012479 12 - TSS region transcription start site region 109621
Tssr109622 11 83012921 to 83012930 9 - TSS region transcription start site region 109622
D11Pas14 11 83019922 to 83020603 681 DNA segment DNA segment, Chr 11, Pasteur Institute 14
Tssr109623 11 83020086 to 83020113 27 - TSS region transcription start site region 109623
Tssr109624 11 83020115 to 83020146 31 - TSS region transcription start site region 109624
Tssr109625 11 83020219 to 83020231 12 - TSS region transcription start site region 109625
Tssr109626 11 83020251 to 83020280 29 - TSS region transcription start site region 109626
Tssr109627 11 83020350 to 83020361 11 - TSS region transcription start site region 109627
Tssr109628 11 83020727 to 83020738 11 - TSS region transcription start site region 109628
Tssr109629 11 83020756 to 83020767 11 - TSS region transcription start site region 109629
Tssr109630 11 83020770 to 83020783 13 - TSS region transcription start site region 109630
Tssr109631 11 83020788 to 83020843 55 - TSS region transcription start site region 109631
Gm11425 11 83027500 to 83027997 497 - pseudogene predicted gene 11425
Slfn10-ps 11 83028130 to 83040042 11912 - pseudogene schlafen 10, pseudogene
Gm27598 11 83032632 to 83032694 62 - miRNA gene predicted gene, 27598
Gm48434 11 83036377 to 83036908 531 + pseudogene predicted gene, 48434
Tssr103619 11 83039859 to 83039874 15 + TSS region transcription start site region 103619
Tssr109632 11 83040193 to 83040219 26 - TSS region transcription start site region 109632
Tssr109633 11 83040416 to 83040432 16 - TSS region transcription start site region 109633
Tssr109634 11 83040471 to 83040480 9 - TSS region transcription start site region 109634
Tssr109635 11 83040483 to 83040518 35 - TSS region transcription start site region 109635
Tssr103620 11 83040607 to 83040612 5 + TSS region transcription start site region 103620
Tssr103621 11 83041256 to 83041288 32 + TSS region transcription start site region 103621