MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:72311727-72412350

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Etax9	11	55394159 to 72319101	16924942		QTL	ethanol induced ataxia 9
Xaf1	11	72301629 to 72313733	12104	+	protein coding gene	XIAP associated factor 1
Cpgi3218	11	72314126 to 72314772	646		CpG island	CpG island 3218
Tssr102837	11	72314438 to 72314455	17	+	TSS region	transcription start site region 102837
Fbxo39	11	72314444 to 72319416	4972	+	protein coding gene	F-box protein 39
D11Mit219	11	72318970 to 72319101	131		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 219
Alcp2	11	72318970 to 84840636	12521666		QTL	alcohol preference locus 2, female specific
Gm23224	11	72340370 to 72340640	270	+	unclassified non-coding RNA gene	predicted gene, 23224
Tekt1	11	72344722 to 72362442	17720	-	protein coding gene	tektin 1
Cpgi3219	11	72361727 to 72362350	623		CpG island	CpG island 3219
Tssr109083	11	72361837 to 72361899	62	-	TSS region	transcription start site region 109083
Tssr102838	11	72361911 to 72361926	15	+	TSS region	transcription start site region 102838
Gm34317	11	72361928 to 72370855	8927	+	lncRNA gene	predicted gene, 34317
Mir6338	11	72388756 to 72388864	108	+	miRNA gene	microRNA 6338
Smtnl2	11	72389164 to 72411713	22549	-	protein coding gene	smoothelin-like 2
Tssr109084	11	72410307 to 72410320	13	-	TSS region	transcription start site region 109084
Cpgi3220	11	72410608 to 72412016	1408		CpG island	CpG island 3220
Tssr109085	11	72411695 to 72411718	23	-	TSS region	transcription start site region 109085
Tssr109086	11	72411721 to 72411733	12	-	TSS region	transcription start site region 109086