Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69666887-69706898

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif4a1 11 69666936 to 69672423 5487 - protein coding gene eukaryotic translation initiation factor 4A1
Tssr108764 11 69667225 to 69667255 30 - TSS region transcription start site region 108764
Tssr108765 11 69667370 to 69667386 16 - TSS region transcription start site region 108765
Gm24029 11 69667834 to 69667976 142 - snoRNA gene predicted gene, 24029
Gm25835 11 69668852 to 69668995 143 - snoRNA gene predicted gene, 25835
Tssr108766 11 69668991 to 69668996 5 - TSS region transcription start site region 108766
Gm22988 11 69669635 to 69669778 143 - snoRNA gene predicted gene, 22988
Cpgi3141 11 69670916 to 69672763 1847 CpG island CpG island 3141
Tssr108767 11 69671214 to 69671238 24 - TSS region transcription start site region 108767
Tssr108768 11 69671244 to 69671284 40 - TSS region transcription start site region 108768
Tssr102518 11 69671366 to 69671400 34 + TSS region transcription start site region 102518
Tssr108769 11 69672307 to 69672332 25 - TSS region transcription start site region 108769
Tssr108770 11 69672334 to 69672359 25 - TSS region transcription start site region 108770
Tssr108771 11 69672378 to 69672398 20 - TSS region transcription start site region 108771
Tssr108772 11 69672407 to 69672418 11 - TSS region transcription start site region 108772
Senp3 11 69673115 to 69682084 8969 - protein coding gene SUMO/sentrin specific peptidase 3
Tssr108773 11 69680641 to 69680665 24 - TSS region transcription start site region 108773
Cpgi3142 11 69681267 to 69682293 1026 CpG island CpG island 3142
Tssr108774 11 69681793 to 69681804 11 - TSS region transcription start site region 108774
Tssr108775 11 69681822 to 69681856 34 - TSS region transcription start site region 108775
Tssr108776 11 69681870 to 69681896 26 - TSS region transcription start site region 108776
Tssr108777 11 69681903 to 69681953 50 - TSS region transcription start site region 108777
Tssr108778 11 69681959 to 69681981 22 - TSS region transcription start site region 108778
Tssr108779 11 69681994 to 69682005 11 - TSS region transcription start site region 108779
Tssr108780 11 69682070 to 69682079 9 - TSS region transcription start site region 108780
Tnfsf13os 11 69682138 to 69691141 9003 + antisense lncRNA gene tumor necrosis factor (ligand) superfamily, member 13, opposite strand
Tnfsfm13 11 69682577 to 69696098 13521 - protein coding gene tumor necrosis factor (ligand) superfamily, membrane-bound member 13
Tnfsf13 11 69682846 to 69685784 2938 - protein coding gene tumor necrosis factor (ligand) superfamily, member 13
Tssr102519 11 69684323 to 69684335 12 + TSS region transcription start site region 102519
Tssr102520 11 69684355 to 69684384 29 + TSS region transcription start site region 102520
Tssr102521 11 69684396 to 69684411 15 + TSS region transcription start site region 102521
Tssr102522 11 69684489 to 69684507 18 + TSS region transcription start site region 102522
Tssr102523 11 69684551 to 69684562 11 + TSS region transcription start site region 102523
Tssr108781 11 69685275 to 69685335 60 - TSS region transcription start site region 108781
Tssr108782 11 69685337 to 69685348 11 - TSS region transcription start site region 108782
Tssr108783 11 69685520 to 69685536 16 - TSS region transcription start site region 108783
Tssr108784 11 69685537 to 69685565 28 - TSS region transcription start site region 108784
Tssr102524 11 69685937 to 69685950 13 + TSS region transcription start site region 102524
Tnfsf12 11 69686250 to 69695849 9599 - protein coding gene tumor necrosis factor (ligand) superfamily, member 12
Tssr102525 11 69686707 to 69686742 35 + TSS region transcription start site region 102525
Tssr108785 11 69686723 to 69686739 16 - TSS region transcription start site region 108785
Tssr108786 11 69686747 to 69686797 50 - TSS region transcription start site region 108786
Tssr108787 11 69686828 to 69686840 12 - TSS region transcription start site region 108787
Tssr108788 11 69686887 to 69686898 11 - TSS region transcription start site region 108788
Tssr108789 11 69686916 to 69686928 12 - TSS region transcription start site region 108789
Tssr108790 11 69686939 to 69686953 14 - TSS region transcription start site region 108790
Tssr108791 11 69687029 to 69687045 16 - TSS region transcription start site region 108791
Tssr108792 11 69687061 to 69687081 20 - TSS region transcription start site region 108792
Tssr108793 11 69687286 to 69687300 14 - TSS region transcription start site region 108793
Tssr108794 11 69687309 to 69687327 18 - TSS region transcription start site region 108794
Tssr102526 11 69692649 to 69692662 13 + TSS region transcription start site region 102526
Tssr108795 11 69693537 to 69693552 15 - TSS region transcription start site region 108795
Tssr108796 11 69693651 to 69693667 16 - TSS region transcription start site region 108796
Cpgi3143 11 69695603 to 69696084 481 CpG island CpG island 3143
Tssr108797 11 69695639 to 69695713 74 - TSS region transcription start site region 108797
Tssr108798 11 69695753 to 69695785 32 - TSS region transcription start site region 108798
Tssr108799 11 69695802 to 69695872 70 - TSS region transcription start site region 108799
Tssr108800 11 69695881 to 69695900 19 - TSS region transcription start site region 108800
Tssr108801 11 69695948 to 69695959 11 - TSS region transcription start site region 108801
Tssr108802 11 69695988 to 69696011 23 - TSS region transcription start site region 108802
Tssr108803 11 69696037 to 69696055 18 - TSS region transcription start site region 108803
Tssr108804 11 69696058 to 69696102 44 - TSS region transcription start site region 108804