Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:69389320-69409338

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyb5d1 11 69391925 to 69395631 3706 - protein coding gene cytochrome b5 domain containing 1
Cpgi3123 11 69394778 to 69395107 329 CpG island CpG island 3123
Tssr108645 11 69395135 to 69395139 4 - TSS region transcription start site region 108645
Tssr108646 11 69395432 to 69395478 46 - TSS region transcription start site region 108646
Cpgi3124 11 69395439 to 69396419 980 CpG island CpG island 3124
Tssr108647 11 69395663 to 69395712 49 - TSS region transcription start site region 108647
Tssr102450 11 69395747 to 69395754 7 + TSS region transcription start site region 102450
Tssr102451 11 69395785 to 69395828 43 + TSS region transcription start site region 102451
Naa38 11 69395791 to 69396671 880 + protein coding gene N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Tssr102452 11 69395829 to 69395862 33 + TSS region transcription start site region 102452
Tssr102453 11 69396107 to 69396180 73 + TSS region transcription start site region 102453
Tmem88 11 69396519 to 69398234 1715 - protein coding gene transmembrane protein 88
Cpgi3125 11 69397612 to 69398289 677 CpG island CpG island 3125
Tssr108648 11 69398226 to 69398243 17 - TSS region transcription start site region 108648
Kdm6b 11 69398508 to 69413675 15167 - protein coding gene KDM1 lysine (K)-specific demethylase 6B
Tssr108649 11 69398945 to 69398999 54 - TSS region transcription start site region 108649
Tssr108650 11 69399177 to 69399192 15 - TSS region transcription start site region 108650
Tssr108651 11 69399307 to 69399313 6 - TSS region transcription start site region 108651
Tssr108652 11 69399320 to 69399338 18 - TSS region transcription start site region 108652
Cpgi3126 11 69399396 to 69400259 863 CpG island CpG island 3126
Tssr108653 11 69399421 to 69399445 24 - TSS region transcription start site region 108653
Tssr108654 11 69399602 to 69399606 4 - TSS region transcription start site region 108654
Cpgi3127 11 69401269 to 69401620 351 CpG island CpG island 3127
Tssr108655 11 69401338 to 69401367 29 - TSS region transcription start site region 108655
Kdm6bos 11 69401513 to 69402700 1187 + antisense lncRNA gene KDM1 lysine (K)-specific demethylase 6B, opposite strand
Tssr108656 11 69404972 to 69404996 24 - TSS region transcription start site region 108656
Tssr102454 11 69405178 to 69405195 17 + TSS region transcription start site region 102454
Tssr108657 11 69405231 to 69405259 28 - TSS region transcription start site region 108657
Tssr108658 11 69405268 to 69405286 18 - TSS region transcription start site region 108658
Tssr108659 11 69405442 to 69405461 19 - TSS region transcription start site region 108659
Tssr108660 11 69405873 to 69405911 38 - TSS region transcription start site region 108660
Tssr108661 11 69406755 to 69406770 15 - TSS region transcription start site region 108661
Tssr102455 11 69406853 to 69406878 25 + TSS region transcription start site region 102455
Tssr108662 11 69407606 to 69407620 14 - TSS region transcription start site region 108662
Tssr108663 11 69407637 to 69407649 12 - TSS region transcription start site region 108663
Tssr108664 11 69407813 to 69407831 18 - TSS region transcription start site region 108664
Cpgi3128 11 69408519 to 69411903 3384 CpG island CpG island 3128
Tssr108665 11 69408558 to 69408562 4 - TSS region transcription start site region 108665
Tssr3543 11 69408680 to 69408724 44 - TSS region transcription start site region 3543
Tssr102456 11 69408911 to 69408944 33 + TSS region transcription start site region 102456
Tssr108666 11 69409146 to 69409160 14 - TSS region transcription start site region 108666
Tssr102457 11 69409281 to 69409304 23 + TSS region transcription start site region 102457