MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:60810631-60878423

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Shmt1	11	60788886 to 60811265	22379	-	protein coding gene	serine hydroxymethyltransferase 1 (soluble)
Cpgi2996	11	60810890 to 60811383	493		CpG island	CpG island 2996
Tssr108309	11	60811024 to 60811027	3	-	TSS region	transcription start site region 108309
Tssr108310	11	60811105 to 60811210	105	-	TSS region	transcription start site region 108310
Tssr108311	11	60811228 to 60811241	13	-	TSS region	transcription start site region 108311
Tssr108312	11	60811255 to 60811270	15	-	TSS region	transcription start site region 108312
Gm12611	11	60816375 to 60817747	1372	+	pseudogene	predicted gene 12611
Gm12618	11	60818796 to 60819278	482	-	pseudogene	predicted gene 12618
Tssr108313	11	60819316 to 60819317	1	-	TSS region	transcription start site region 108313
Cpgi2997	11	60830518 to 60831108	590		CpG island	CpG island 2997
Dhrs7b	11	60830631 to 60858423	27792	+	protein coding gene	dehydrogenase/reductase (SDR family) member 7B
Tssr101923	11	60830658 to 60830686	28	+	TSS region	transcription start site region 101923
Tssr101924	11	60830690 to 60830730	40	+	TSS region	transcription start site region 101924
Tssr101925	11	60837837 to 60837866	29	+	TSS region	transcription start site region 101925
Tmem11	11	60864452 to 60879038	14586	-	protein coding gene	transmembrane protein 11
Cpgi2998	11	60878000 to 60879392	1392		CpG island	CpG island 2998
Tssr101926	11	60878191 to 60878196	5	+	TSS region	transcription start site region 101926
Tssr101927	11	60878361 to 60878375	14	+	TSS region	transcription start site region 101927