Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:48853950-48973960

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2786 11 48853825 to 48854222 397 CpG island CpG island 2786
Cpgi2787 11 48855323 to 48855781 458 CpG island CpG island 2787
n-TPtgg4 11 48856280 to 48856351 71 + tRNA gene nuclear encoded tRNA proline 4 (anticodon TGG)
n-TVaac7 11 48856637 to 48856709 72 + tRNA gene nuclear encoded tRNA valine 7 (anticodon AAC)
Cpgi2788 11 48856873 to 48857097 224 CpG island CpG island 2788
n-TLaag6 11 48856974 to 48857055 81 - tRNA gene nuclear encoded tRNA leucine 6 (anticodon AAG)
Irgm1 11 48865245 to 48871454 6209 - protein coding gene immunity-related GTPase family M member 1
Tssr107645 11 48866229 to 48866265 36 - TSS region transcription start site region 107645
Tssr107646 11 48866336 to 48866374 38 - TSS region transcription start site region 107646
Tssr107647 11 48866982 to 48867009 27 - TSS region transcription start site region 107647
Tssr107648 11 48868096 to 48868113 17 - TSS region transcription start site region 107648
Tssr107649 11 48868609 to 48868630 21 - TSS region transcription start site region 107649
Tssr107650 11 48871146 to 48871152 6 - TSS region transcription start site region 107650
Tssr107651 11 48871176 to 48871190 14 - TSS region transcription start site region 107651
Tssr107652 11 48871205 to 48871210 5 - TSS region transcription start site region 107652
Tssr107653 11 48871259 to 48871273 14 - TSS region transcription start site region 107653
Tssr107654 11 48871278 to 48871300 22 - TSS region transcription start site region 107654
Tssr107655 11 48871317 to 48871337 20 - TSS region transcription start site region 107655
Tssr107656 11 48871344 to 48871407 63 - TSS region transcription start site region 107656
Tssr107657 11 48871408 to 48871424 16 - TSS region transcription start site region 107657
Tssr101152 11 48871638 to 48871662 24 + TSS region transcription start site region 101152
Tssr101153 11 48871862 to 48871869 7 + TSS region transcription start site region 101153
Tssr107658 11 48872279 to 48872340 61 - TSS region transcription start site region 107658
Tssr107659 11 48872349 to 48872358 9 - TSS region transcription start site region 107659
Tssr101154 11 48872558 to 48872560 2 + TSS region transcription start site region 101154
Gm5431 11 48887422 to 48902152 14730 - protein coding gene predicted gene 5431
Tssr107660 11 48891540 to 48891565 25 - TSS region transcription start site region 107660
Tssr107661 11 48891638 to 48891645 7 - TSS region transcription start site region 107661
Tssr107662 11 48891661 to 48891687 26 - TSS region transcription start site region 107662
Tssr107663 11 48891791 to 48891804 13 - TSS region transcription start site region 107663
Tssr107664 11 48891884 to 48891895 11 - TSS region transcription start site region 107664
Tssr107665 11 48891990 to 48892001 11 - TSS region transcription start site region 107665
Tssr107666 11 48892026 to 48892041 15 - TSS region transcription start site region 107666
Tssr107667 11 48892128 to 48892131 3 - TSS region transcription start site region 107667
Tssr107668 11 48892156 to 48892166 10 - TSS region transcription start site region 107668
Tssr107669 11 48893379 to 48893401 22 - TSS region transcription start site region 107669
Tssr107670 11 48893415 to 48893432 17 - TSS region transcription start site region 107670
Tssr101155 11 48901299 to 48901313 14 + TSS region transcription start site region 101155
Tssr101156 11 48901314 to 48901339 25 + TSS region transcription start site region 101156
Tssr107671 11 48902011 to 48902044 33 - TSS region transcription start site region 107671
Tssr107672 11 48902104 to 48902128 24 - TSS region transcription start site region 107672
Tssr107673 11 48902151 to 48902201 50 - TSS region transcription start site region 107673
Tssr101157 11 48902286 to 48902299 13 + TSS region transcription start site region 101157
Gm12185 11 48904656 to 48927182 22526 - protein coding gene predicted gene 12185
Tssr101158 11 48910578 to 48910580 2 + TSS region transcription start site region 101158
Tssr107674 11 48913950 to 48913960 10 - TSS region transcription start site region 107674
Tssr107675 11 48927177 to 48927182 5 - TSS region transcription start site region 107675
Tssr107676 11 48928224 to 48928229 5 - TSS region transcription start site region 107676
Tssr107677 11 48945241 to 48945263 22 - TSS region transcription start site region 107677
Psme2b 11 48945354 to 48946190 836 - protein coding gene protease (prosome, macropain) activator subunit 2B
Tssr107678 11 48945485 to 48945517 32 - TSS region transcription start site region 107678
Tssr107679 11 48946148 to 48946150 2 - TSS region transcription start site region 107679
9930111J21Rik1 11 48946150 to 48979381 33231 - protein coding gene RIKEN cDNA 9930111J21 gene 1