Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:119578451-119938452

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4276 11 119602785 to 119603900 1115 CpG island CpG island 4276
Rptor 11 119602905 to 119899576 296671 + protein coding gene regulatory associated protein of MTOR, complex 1
Tssr106242 11 119602981 to 119603034 53 + TSS region transcription start site region 106242
Tssr106243 11 119603580 to 119603611 31 + TSS region transcription start site region 106243
Gm11761 11 119646186 to 119646630 444 - pseudogene predicted gene 11761
Tssr106244 11 119671259 to 119671282 23 + TSS region transcription start site region 106244
Tssr106245 11 119671293 to 119671304 11 + TSS region transcription start site region 106245
Tssr106246 11 119675470 to 119675482 12 + TSS region transcription start site region 106246
Tssr112233 11 119676955 to 119676963 8 - TSS region transcription start site region 112233
Tssr106247 11 119680993 to 119681030 37 + TSS region transcription start site region 106247
Tssr106248 11 119724989 to 119725021 32 + TSS region transcription start site region 106248
Tssr106249 11 119729526 to 119729548 22 + TSS region transcription start site region 106249
Tssr106250 11 119729578 to 119729592 14 + TSS region transcription start site region 106250
Gm23663 11 119746401 to 119746480 79 + snoRNA gene predicted gene, 23663
Tssr112234 11 119758451 to 119758452 1 - TSS region transcription start site region 112234
Rptoros 11 119820812 to 119834365 13553 - antisense lncRNA gene regulatory associated protein of MTOR, complex 1, opposite strand
Tssr112235 11 119834347 to 119834360 13 - TSS region transcription start site region 112235
Tssr112236 11 119834408 to 119834421 13 - TSS region transcription start site region 112236
Tssr112237 11 119834461 to 119834488 27 - TSS region transcription start site region 112237
Tssr106251 11 119835578 to 119835601 23 + TSS region transcription start site region 106251
Tssr112238 11 119836911 to 119836953 42 - TSS region transcription start site region 112238
Tssr106252 11 119837265 to 119837307 42 + TSS region transcription start site region 106252
Tssr106253 11 119856200 to 119856215 15 + TSS region transcription start site region 106253
Tssr106254 11 119856237 to 119856253 16 + TSS region transcription start site region 106254
Tssr106255 11 119856257 to 119856268 11 + TSS region transcription start site region 106255
Tssr106256 11 119856277 to 119856301 24 + TSS region transcription start site region 106256
Tssr112239 11 119863410 to 119863457 47 - TSS region transcription start site region 112239
Tssr106257 11 119876004 to 119876017 13 + TSS region transcription start site region 106257
Gm39485 11 119908597 to 119913458 4861 - lncRNA gene predicted gene, 39485
Cpgi4277 11 119913252 to 119914525 1273 CpG island CpG island 4277
Tssr106258 11 119913423 to 119913434 11 + TSS region transcription start site region 106258
Chmp6 11 119913446 to 119919552 6106 + protein coding gene charged multivesicular body protein 6
Tssr106259 11 119913802 to 119913854 52 + TSS region transcription start site region 106259
Tssr106260 11 119916303 to 119916337 34 + TSS region transcription start site region 106260
Tssr106261 11 119916647 to 119916683 36 + TSS region transcription start site region 106261
Tssr3753 11 119916696 to 119916707 11 + TSS region transcription start site region 3753
Tssr112240 11 119917181 to 119917206 25 - TSS region transcription start site region 112240
Cpgi4278 11 119928332 to 119928630 298 CpG island CpG island 4278
Tssr106262 11 119928601 to 119928614 13 + TSS region transcription start site region 106262
2900060N18Rik 11 119933009 to 119933534 525 unclassified gene RIKEN cDNA 2900060N18 gene
Gm11767 11 119935803 to 119942698 6895 - antisense lncRNA gene predicted gene 11767
Tssr112241 11 119937427 to 119937444 17 - TSS region transcription start site region 112241
Tssr112242 11 119937446 to 119937466 20 - TSS region transcription start site region 112242
Tssr112243 11 119937807 to 119937818 11 - TSS region transcription start site region 112243