MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:118635933-118889489

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr112185	11	118650994 to 118650997	3	-	TSS region	transcription start site region 112185
Tssr112186	11	118663521 to 118663522	1	-	TSS region	transcription start site region 112186
Cpgi4239	11	118693028 to 118693341	313		CpG island	CpG island 4239
Cpgi4240	11	118744771 to 118745009	238		CpG island	CpG island 4240
C230069I12Rik	11	118760933 to 118764489	3556		unclassified gene	RIKEN cDNA C230069I12 gene
Gm11750	11	118791372 to 118793828	2456	+	lincRNA gene	predicted gene 11750
Tssr112187	11	118796739 to 118796753	14	-	TSS region	transcription start site region 112187
Tssr112188	11	118797713 to 118797724	11	-	TSS region	transcription start site region 112188
Tssr112189	11	118797730 to 118797746	16	-	TSS region	transcription start site region 112189
Tssr112190	11	118797764 to 118797774	10	-	TSS region	transcription start site region 112190
Tssr112191	11	118797979 to 118797989	10	-	TSS region	transcription start site region 112191
Gm25040	11	118852723 to 118852788	65	-	miRNA gene	predicted gene, 25040
Gm11749	11	118866257 to 118867220	963	-	sense intronic lncRNA gene	predicted gene 11749
Tssr112192	11	118868537 to 118868555	18	-	TSS region	transcription start site region 112192
Tssr112193	11	118868922 to 118868937	15	-	TSS region	transcription start site region 112193
Tssr112194	11	118869119 to 118869158	39	-	TSS region	transcription start site region 112194
Tssr3751	11	118869443 to 118869458	15	-	TSS region	transcription start site region 3751