MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:117463445-117683540

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm46264	11	117461620 to 117463706	2086	-	lncRNA gene	predicted gene, 46264
Gm34418	11	117479875 to 117482597	2722	-	lincRNA gene	predicted gene, 34418
Cpgi4211	11	117482554 to 117482855	301		CpG island	CpG island 4211
Gm11733	11	117484368 to 117489014	4646	+	protein coding gene	predicted gene 11733
Gm34502	11	117490661 to 117498295	7634	-	lncRNA gene	predicted gene, 34502
Tssr106062	11	117523526 to 117523544	18	+	TSS region	transcription start site region 106062
Gm11734	11	117523603 to 117532205	8602	+	lincRNA gene	predicted gene 11734
D11Dcr40	11	117573445 to 117573540	95		DNA segment	DNA Segment, Chr 11, Derry C. Roopenian 40
Gm35170	11	117594911 to 117639763	44852	-	lncRNA gene	predicted gene, 35170
2900041M22Rik	11	117611247 to 117613417	2170	+	lncRNA gene	RIKEN cDNA 2900041M22 gene
Tssr112028	11	117639738 to 117639784	46	-	TSS region	transcription start site region 112028
Cpgi4212	11	117653682 to 117656313	2631		CpG island	CpG island 4212
Tssr106063	11	117654211 to 117654258	47	+	TSS region	transcription start site region 106063
Tnrc6c	11	117654289 to 117763439	109150	+	protein coding gene	trinucleotide repeat containing 6C
Tssr112029	11	117654549 to 117654552	3	-	TSS region	transcription start site region 112029
Tssr3743	11	117654721 to 117654741	20	+	TSS region	transcription start site region 3743
Tssr106064	11	117654798 to 117654824	26	+	TSS region	transcription start site region 106064
Tssr106065	11	117665503 to 117665514	11	+	TSS region	transcription start site region 106065