MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:117334389-117495368

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sept9	11	117199661 to 117362325	162664	+	protein coding gene	septin 9
Tssr112025	11	117360476 to 117360492	16	-	TSS region	transcription start site region 112025
Tssr112026	11	117360553 to 117360566	13	-	TSS region	transcription start site region 112026
Tssr106059	11	117361261 to 117361277	16	+	TSS region	transcription start site region 106059
Tssr106060	11	117361305 to 117361329	24	+	TSS region	transcription start site region 106060
A930024O17Rik	11	117384572 to 117385378	806		unclassified gene	RIKEN cDNA A930024O17 gene
Cpgi4209	11	117394367 to 117394936	569		CpG island	CpG island 4209
Gm34128	11	117407838 to 117411284	3446	-	lncRNA gene	predicted gene, 34128
Cpgi4210	11	117407849 to 117408126	277		CpG island	CpG island 4210
Gm11729	11	117414389 to 117415368	979	+	lincRNA gene	predicted gene 11729
Gm8624	11	117420640 to 117421717	1077	-	pseudogene	predicted gene 8624
Tssr112027	11	117421157 to 117421162	5	-	TSS region	transcription start site region 112027
Gm11732	11	117426178 to 117438866	12688	+	lncRNA gene	predicted gene 11732
Tssr106061	11	117426202 to 117426212	10	+	TSS region	transcription start site region 106061
Gm46264	11	117461620 to 117463706	2086	-	lncRNA gene	predicted gene, 46264
Gm34418	11	117479875 to 117482597	2722	-	lincRNA gene	predicted gene, 34418
Cpgi4211	11	117482554 to 117482855	301		CpG island	CpG island 4211
Gm11733	11	117484368 to 117489014	4646	+	protein coding gene	predicted gene 11733
Gm34502	11	117490661 to 117498295	7634	-	lncRNA gene	predicted gene, 34502